RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZNF227Q86WZ6 799 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 JAMLQ86YT9 394 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 FMNL3Q8IVF7 1028 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 SCUBE1Q8IWY4 988 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 MRPL41Q8IXM3 137 aaKnown RBP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 RNF214Q8ND24 703 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 LEO1Q8WVC0 666 aaPredicted RBP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 SMARCC1Q92922 1105 aaPredicted RBP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 ACDQ96AP0 544 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 BTBD6Q96KE9 485 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 IER2Q9BTL4 223 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 LGR4Q9BXB1 951 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 FOXQ1Q9C009 403 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 RNF208Q9H0X6 261 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 LGR6Q9HBX8 967 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 NCOA5Q9HCD5 579 aaKnown RBP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 ARHGEF4Q9NR80 690 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 DISC1Q9NRI5 854 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 TYW1Q9NV66 732 aaKnown RBP3.12□□□□□ -1.91
GABPB1-209ENST00000559100 KCNK4Q9NYG8 393 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 CRIM1Q9NZV1 1036 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 NDOR1Q9UHB4 597 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 SFMBT1Q9UHJ3 866 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 FBXL21Q9UKT6 434 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 AKT3Q9Y243 479 aa3.12□□□□□ -1.91
GABPB1-209ENST00000559100 C9IYK1 514 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 DLL1O00548 723 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 PLD2O14939 933 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 SART1O43290 800 aaKnown RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 GAS2O43903 313 aaKnown RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 DEAF1O75398 565 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 ADH5P11766 374 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 PABPC1P11940 636 aaKnown RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 ITGA4P13612 1032 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 DRD2P14416 443 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 CDKN1CP49918 316 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 USP11P51784 963 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 RNF4P78317 190 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 NBPF12Q5TAG4 269 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 POMZP3Q6PJE2 187 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 THNSL2Q86YJ6 484 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 SMYD4Q8IYR2 804 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 CRACR2BQ8N4Y2 399 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 DTWD1Q8N5C7 304 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 CYB5D2Q8WUJ1 264 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 STAG1Q8WVM7 1258 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 ISL2Q96A47 359 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 EXOC2Q96KP1 924 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 FANCD2OSQ96PS1 177 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 MAGEC2Q9UBF1 373 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-209ENST00000559100 APEX2Q9UBZ4 518 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 JAG2Q9Y219 1238 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 PCDHGC5Q9Y5F6 944 aa3.11□□□□□ -1.91
GABPB1-209ENST00000559100 SHISA8B8ZZ34 492 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 ALG1L2C9J202 215 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 TBX1O43435 398 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 OIP5O43482 229 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 OPA1O60313 960 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 RFPL3O75679 317 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 KCNH1O95259 989 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 WISP1O95388 367 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 CST3P01034 146 aaPredicted RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 NEFMP07197 916 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 ELNP15502 786 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 FLT3P36888 993 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 GRIA2P42262 883 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 GUCY2FP51841 1108 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 EXOSC10Q01780 885 aaKnown RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 RING1Q06587 406 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 SOX4Q06945 474 aaPredicted RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 STRN3Q13033 797 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 AUHQ13825 339 aaKnown RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 MAP7Q14244 749 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 NBPF9Q3BBW0 867 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 FNDC3BQ53EP0 1204 aaKnown RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 BRDTQ58F21 947 aaPredicted RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 C1orf229Q6ZS94 237 aaPredicted RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 DDX46Q7L014 1031 aaKnown RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 ARMCX6Q7L4S7 300 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 UBE3DQ7Z6J8 389 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 LRRTM3Q86VH5 581 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 DDX42Q86XP3 938 aaKnown RBP eCLIP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 WDR75Q8IWA0 830 aaKnown RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 PPM1KQ8N3J5 372 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 BVESQ8NE79 360 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 BTN2A2Q8WVV5 523 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 BRF1Q92994 677 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 KISS1RQ969F8 398 aaPredicted RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 ZDHHC15Q96MV8 337 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 CLUHP3Q96NS8 147 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 PSMD1Q99460 953 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 MIPEPQ99797 713 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 DSCC1Q9BVC3 393 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 TARS2Q9BW92 718 aaKnown RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 MRPL4Q9BYD3 311 aaKnown RBP3.1□□□□□ -1.91
GABPB1-209ENST00000559100 TMPRSS13Q9BYE2 586 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 KLHL25Q9H0H3 589 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 NOL6Q9H6R4 1146 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms