RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 LRRN2O75325 713 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 HDLBPQ00341 1268 aaKnown RBP4.74□□□□□ -1.65
LRRC28-212ENST00000558911 MAP3K11Q16584 847 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 SKOR2Q2VWA4 1001 aaPredicted RBP4.74□□□□□ -1.65
LRRC28-212ENST00000558911 GAB4Q2WGN9 574 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 GGNQ86UU5 652 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 PPP1R13LQ8WUF5 828 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 TMEM87BQ96K49 555 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 TANGO6Q9C0B7 1094 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 LNPKQ9C0E8 428 aa4.74□□□□□ -1.65
LRRC28-212ENST00000558911 ZNF552Q9H707 407 aaPredicted RBP4.74□□□□□ -1.65
LRRC28-212ENST00000558911 CELA3BP08861 270 aa4.73□□□□□ -1.65
LRRC28-212ENST00000558911 SRSF3P84103 164 aaKnown RBP4.73□□□□□ -1.65
LRRC28-212ENST00000558911 NOP9Q86U38 636 aaKnown RBP4.73□□□□□ -1.65
LRRC28-212ENST00000558911 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
LRRC28-212ENST00000558911 SPPL2CQ8IUH8 684 aa4.73□□□□□ -1.65
LRRC28-212ENST00000558911 TMEM151BQ8IW70 566 aa4.73□□□□□ -1.65
LRRC28-212ENST00000558911 SIRT5Q9NXA8 310 aa4.73□□□□□ -1.65
LRRC28-212ENST00000558911 KCNH3Q9ULD8 1083 aa4.73□□□□□ -1.65
LRRC28-212ENST00000558911 CEP131Q9UPN4 1083 aa4.73□□□□□ -1.65
LRRC28-212ENST00000558911 IRAK3Q9Y616 596 aa4.73□□□□□ -1.65
LRRC28-212ENST00000558911 SBNO2Q9Y2G9 1366 aa4.73□□□□□ -1.65
LRRC28-212ENST00000558911 OR14I1A6ND48 311 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 AFF3P51826 1226 aaKnown RBP4.72□□□□□ -1.65
LRRC28-212ENST00000558911 EAPPQ56P03 285 aaPredicted RBP4.72□□□□□ -1.65
LRRC28-212ENST00000558911 SLC6A19Q695T7 634 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 MRPL41Q8IXM3 137 aaKnown RBP4.72□□□□□ -1.65
LRRC28-212ENST00000558911 DTWD2Q8NBA8 298 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 JARID2Q92833 1246 aaPredicted RBP4.72□□□□□ -1.65
LRRC28-212ENST00000558911 BCL11AQ9H165 835 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 XYLT2Q9H1B5 865 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 C12orf49Q9H741 205 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 RTEL1Q9NZ71 1219 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 EBF1Q9UH73 591 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.72□□□□□ -1.65
LRRC28-212ENST00000558911 SPG7Q9UQ90 795 aa4.72□□□□□ -1.65
LRRC28-212ENST00000558911 ARAP1Q96P48 1450 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 TLDC2A0PJX2 215 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 UPK3BL1B0FP48 263 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 UPK3BL2E5RIL1 263 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 GFRA2O00451 464 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 SCAMP3O14828 347 aaKnown RBP4.71□□□□□ -1.66
LRRC28-212ENST00000558911 SDHBP21912 280 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 TNNI2P48788 182 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 EPHB3P54753 998 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 ATP2B2Q01814 1243 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 PDE4BQ07343 736 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 DUSP4Q13115 394 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 CCDC85BQ15834 202 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-212ENST00000558911 CLEC16AQ2KHT3 1053 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 SV2BQ7L1I2 683 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 SYT8Q8NBV8 401 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 DNAJB8Q8NHS0 232 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 CXorf38Q8TB03 319 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 FBF1Q8TES7 1133 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 ACSF2Q96CM8 615 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-212ENST00000558911 SIGLEC10Q96LC7 697 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 ASB16Q96NS5 453 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 GPR62Q9BZJ7 368 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 ADAM7Q9H2U9 754 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 FAM8A1Q9UBU6 413 aa4.71□□□□□ -1.66
LRRC28-212ENST00000558911 TMA7Q9Y2S6 64 aaKnown RBP4.71□□□□□ -1.66
LRRC28-212ENST00000558911 GIPC1O14908 333 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 USP2O75604 605 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-212ENST00000558911 RPL10P27635 214 aaKnown RBP4.7□□□□□ -1.66
LRRC28-212ENST00000558911 GTF2F1P35269 517 aaKnown RBP eCLIP4.7□□□□□ -1.66
LRRC28-212ENST00000558911 CHRNEQ04844 493 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 RAD51AP2Q09MP3 1159 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 NR0B2Q15466 257 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 CCDC144BQ3MJ40 725 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 LDLRAD1Q5T700 205 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 ERICH6BQ5W0A0 696 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 ALG1LQ6GMV1 187 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 MCATQ8IVS2 390 aaKnown RBP4.7□□□□□ -1.66
LRRC28-212ENST00000558911 ZSCAN29Q8IWY8 852 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-212ENST00000558911 FAM13CQ8NE31 585 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 MICAL1Q8TDZ2 1067 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 ZNF526Q8TF50 670 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-212ENST00000558911 MIR1-1HGQ9H1L0 117 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 TMPRSS5Q9H3S3 457 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 MBD1Q9UIS9 605 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-212ENST00000558911 ZMYM5Q9UJ78 669 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 CORINQ9Y5Q5 1042 aa4.7□□□□□ -1.66
LRRC28-212ENST00000558911 SHISA3A0PJX4 238 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 RAB11FIP3O75154 756 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 PLCG1P19174 1290 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 ATP2B1P20020 1258 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 KRTAP10-2P60368 255 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 MRPL58Q14197 206 aaKnown RBP4.69□□□□□ -1.66
LRRC28-212ENST00000558911 SNX17Q15036 470 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 SLC14A2Q15849 920 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 ANKS4BQ8N8V4 417 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 PSMD1Q99460 953 aa4.69□□□□□ -1.66
LRRC28-212ENST00000558911 CHMP4BP1P59074 171 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 NFKB2Q00653 900 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 TEKQ02763 1124 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 PLP2Q04941 152 aa4.68□□□□□ -1.66
LRRC28-212ENST00000558911 TMED8Q6PL24 325 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-212ENST00000558911 WAPLQ7Z5K2 1190 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms