RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 GPSM3Q9Y4H4 160 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 ATRNL1Q5VV63 1379 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 CAPN5O15484 640 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-206ENST00000558880 CELF2O95319 508 aaKnown RBP8.7□□□□□ -1.02
TRAF3-206ENST00000558880 RAB15P59190 212 aa8.7□□□□□ -1.02
TRAF3-206ENST00000558880 KIF4BQ2VIQ3 1234 aa8.7□□□□□ -1.02
TRAF3-206ENST00000558880 SDR42E1Q8WUS8 393 aa8.7□□□□□ -1.02
TRAF3-206ENST00000558880 TEPSINQ96N21 525 aa8.7□□□□□ -1.02
TRAF3-206ENST00000558880 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRAF3-206ENST00000558880 ADARB2Q9NS39 739 aaKnown RBP8.7□□□□□ -1.02
TRAF3-206ENST00000558880 ZNF70Q9UC06 446 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-206ENST00000558880 MAST2Q6P0Q8 1798 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 CLRN2A0PK11 232 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 ZBBXA8MT70 800 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 HSPD1P10809 573 aaKnown RBP8.69□□□□□ -1.02
TRAF3-206ENST00000558880 BMP1P13497 986 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 MMP14P50281 582 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 NR5A1Q13285 461 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 MCM6Q14566 821 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 ZNF787Q6DD87 383 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 ZSCAN25Q6NSZ9 544 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 SAPCD2Q86UD0 394 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 MAP4K1Q92918 833 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 KCTD15Q96SI1 283 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-206ENST00000558880 BACH2Q9BYV9 841 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 ZFAND3Q9H8U3 227 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 DCP1AQ9NPI6 582 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-206ENST00000558880 USP40Q9NVE5 1235 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
TRAF3-206ENST00000558880 MAP4K5Q9Y4K4 846 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 PCDHB9Q9Y5E1 797 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 CCDC171Q6TFL3 1326 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 RAD50Q92878 1312 aa8.69□□□□□ -1.02
TRAF3-206ENST00000558880 CYP2D7A0A087X1C5 515 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 DDTLA6NHG4 134 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-206ENST00000558880 FGAP02671 866 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 LDHCP07864 332 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 CYP2D6P10635 497 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 TIMP2P16035 220 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 PLCD1P51178 756 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 GSTO1P78417 241 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 RRP1BQ14684 758 aaKnown RBP8.68□□□□□ -1.02
TRAF3-206ENST00000558880 DLGAP5Q15398 846 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 ALX1Q15699 326 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 HABP4Q5JVS0 413 aaKnown RBP8.68□□□□□ -1.02
TRAF3-206ENST00000558880 USP50Q70EL3 339 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-206ENST00000558880 IFNL3Q8IZI9 196 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 OGFOD1Q8N543 542 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 KCNB2Q92953 911 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 ZIC5Q96T25 663 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 DNAJC18Q9H819 358 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 ATP13A2Q9NQ11 1180 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 DIAPH3Q9NSV4 1193 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 HDAC9Q9UKV0 1011 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 FLT1P17948 1338 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 SSC5DA1L4H1 1573 aa8.68□□□□□ -1.02
TRAF3-206ENST00000558880 PATL2C9JE40 543 aaKnown RBP8.67□□□□□ -1.02
TRAF3-206ENST00000558880 H7C1D1 291 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 HIP1O00291 1037 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 ZIC2O95409 532 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-206ENST00000558880 MAP3K10Q02779 954 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 GABPAQ06546 454 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 NECTIN1Q15223 517 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 DDX60LQ5H9U9 1706 aaKnown RBP8.67□□□□□ -1.02
TRAF3-206ENST00000558880 ANGEL2Q5VTE6 544 aaKnown RBP8.67□□□□□ -1.02
TRAF3-206ENST00000558880 FKBP1CQ5VVH2 108 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 CTR9Q6PD62 1173 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 METTL16Q86W50 562 aaKnown RBP8.67□□□□□ -1.02
TRAF3-206ENST00000558880 MAPKAPK5Q8IW41 473 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 TGFBRAP1Q8WUH2 860 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 DSCC1Q9BVC3 393 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 USP26Q9BXU7 913 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 GLIS2Q9BZE0 524 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-206ENST00000558880 OSBPL5Q9H0X9 879 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-206ENST00000558880 GGA3Q9NZ52 723 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 MYH13Q9UKX3 1938 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 PALD1Q9ULE6 856 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 SLC4A4Q9Y6R1 1079 aa8.67□□□□□ -1.02
TRAF3-206ENST00000558880 TCP10L2B9ZVM9 353 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 ENTPD3O75355 529 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 BAG3O95817 575 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 CYP21A2P08686 494 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 FGRP09769 529 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 ABL2P42684 1182 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 RBM5P52756 815 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRAF3-206ENST00000558880 JAG1P78504 1218 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 RASA3Q14644 834 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 SBK1Q52WX2 424 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 INTS6LQ5JSJ4 861 aaKnown RBP8.66□□□□□ -1.02
TRAF3-206ENST00000558880 PRAMEF18Q5VWM3 479 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 STOX1Q6ZVD7 989 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 CCDC116Q8IYX3 515 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 IL17RAQ96F46 866 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 KIF2CQ99661 725 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-206ENST00000558880 TMEM39BQ9GZU3 492 aa8.66□□□□□ -1.02
TRAF3-206ENST00000558880 INCENPQ9NQS7 918 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms