RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 SULF2Q8IWU5 870 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 TMEM130Q8N3G9 435 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 GRIN3AQ8TCU5 1115 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 WFDC12Q8WWY7 111 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 BCL11AQ9H165 835 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 NSD2O96028 1365 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 RGPD1P0DJD0 1748 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 ANKRD26Q9UPS8 1709 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 NME2P22392 152 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 PPP2R1AP30153 589 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 ST13P50502 369 aaKnown RBP5.72□□□□□ -1.49
SPG11-211ENST00000558561 NRG1Q02297 640 aaPredicted RBP5.72□□□□□ -1.49
SPG11-211ENST00000558561 ADGRE1Q14246 886 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 ZNF827Q17R98 1081 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 PDZD3Q86UT5 571 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 TMEM87AQ8NBN3 555 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 RAPGEF4Q8WZA2 1011 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 PIGBQ92521 554 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 PHACTR3Q96KR7 559 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 CORO1BQ9BR76 489 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 AKTIPQ9H8T0 292 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 ASAP1Q9ULH1 1129 aa5.72□□□□□ -1.49
SPG11-211ENST00000558561 F6X3S4 739 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 EIF4EBP3O60516 100 aaPredicted RBP5.71□□□□□ -1.5
SPG11-211ENST00000558561 GSTP1P09211 210 aaKnown RBP5.71□□□□□ -1.5
SPG11-211ENST00000558561 PHKG2P15735 406 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 MTHFSDQ2M296 383 aaKnown RBP5.71□□□□□ -1.5
SPG11-211ENST00000558561 CCDC184Q52MB2 194 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 EXOSC6Q5RKV6 272 aaKnown RBP5.71□□□□□ -1.5
SPG11-211ENST00000558561 PCNX4Q63HM2 1172 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 KCNB2Q92953 911 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 WDR89Q96FK6 387 aaPredicted RBP5.71□□□□□ -1.5
SPG11-211ENST00000558561 RUSC1Q9BVN2 902 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 CCDC86Q9H6F5 360 aaKnown RBP5.71□□□□□ -1.5
SPG11-211ENST00000558561 CBX8Q9HC52 389 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 OVOS2A0A0G2JMS6 1433 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 BTAF1O14981 1849 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 ITGB4P16144 1822 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 IGSF1Q8N6C5 1336 aa5.71□□□□□ -1.5
SPG11-211ENST00000558561 MEGF11A6BM72 1044 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 U2SURPO15042 1029 aaKnown RBP5.7□□□□□ -1.5
SPG11-211ENST00000558561 ZBTB7AO95365 584 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 RECKO95980 971 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 DRD2P14416 443 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 LIG1P18858 919 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 VAMP1P23763 118 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 ZNF252P-AS1Q0IIN9 211 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 PDE3AQ14432 1141 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 MAP1SQ66K74 1059 aaPredicted RBP5.7□□□□□ -1.5
SPG11-211ENST00000558561 TTBK2Q6IQ55 1244 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 TXNRD3Q86VQ6 643 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 UBL7Q96S82 380 aaPredicted RBP5.7□□□□□ -1.5
SPG11-211ENST00000558561 TMPRSS13Q9BYE2 586 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 RNF208Q9H0X6 261 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 ATG3Q9NT62 314 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 TNS2Q63HR2 1409 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 NUP188Q5SRE5 1749 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 TOGARAM1Q9Y4F4 1720 aa5.7□□□□□ -1.5
SPG11-211ENST00000558561 ABCC6O95255 1503 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 RTL1A6NKG5 1358 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 BCL9O00512 1426 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 NCAPD2Q15021 1401 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 KCNQ3O43525 872 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 ZNF862O60290 1169 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 DIAPH1O60610 1272 aaKnown RBP5.69□□□□□ -1.5
SPG11-211ENST00000558561 GLB1P16278 677 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 GATA4P43694 442 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 SLC39A6Q13433 755 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 ITPK1Q13572 414 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 DCTN1Q14203 1278 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 SLC15A2Q16348 729 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 ZNF530Q6P9A1 599 aaPredicted RBP5.69□□□□□ -1.5
SPG11-211ENST00000558561 IL17REQ8NFR9 667 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 MEGF10Q96KG7 1140 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 NOC4LQ9BVI4 516 aaKnown RBP5.69□□□□□ -1.5
SPG11-211ENST00000558561 EMILIN2Q9BXX0 1053 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 COPRSQ9NQ92 184 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 RAD18Q9NS91 495 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 TLR6Q9Y2C9 796 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 SAMM50Q9Y512 469 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 RREB1Q92766 1687 aa5.69□□□□□ -1.5
SPG11-211ENST00000558561 DOT1LQ8TEK3 1739 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 AOC2O75106 756 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 LIG3P49916 1009 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 PTPN11Q06124 597 aaPredicted RBP5.68□□□□□ -1.5
SPG11-211ENST00000558561 PLEKHO1Q53GL0 409 aaPredicted RBP5.68□□□□□ -1.5
SPG11-211ENST00000558561 AKAP4Q5JQC9 854 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 GPAT2Q6NUI2 795 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 LLGL2Q6P1M3 1020 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 Q6ZS46 218 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 COL23A1Q86Y22 540 aaPredicted RBP5.68□□□□□ -1.5
SPG11-211ENST00000558561 IFNL2Q8IZJ0 200 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 C12orf50Q8NA57 414 aaPredicted RBP5.68□□□□□ -1.5
SPG11-211ENST00000558561 SMG8Q8ND04 991 aaKnown RBP5.68□□□□□ -1.5
SPG11-211ENST00000558561 GPBAR1Q8TDU6 330 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 GGT7Q9UJ14 662 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 PCDHB5Q9Y5E4 795 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 NHSQ6T4R5 1651 aa5.68□□□□□ -1.5
SPG11-211ENST00000558561 KIF24Q5T7B8 1368 aa5.67□□□□□ -1.5
SPG11-211ENST00000558561 SRCAPQ6ZRS2 3230 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms