RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 NAV1Q8NEY1 1877 aa10.02□□□□□ -0.8
TPM1-213ENST00000558400 BAZ2AQ9UIF9 1905 aaKnown RBP10.02□□□□□ -0.81
TPM1-213ENST00000558400 STRNO43815 780 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 RAD21O60216 631 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 FDX1P10109 184 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 CTGFP29279 349 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 GRK4P32298 578 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 FLT3LGP49771 235 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 UBXN2AP68543 259 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 CAP1Q01518 475 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 Q3C1V9 767 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 FAM47AQ5JRC9 791 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 KIAA1211Q6ZU35 1233 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 TRMT44Q8IYL2 757 aaKnown RBP10.02□□□□□ -0.81
TPM1-213ENST00000558400 SPICE1Q8N0Z3 855 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 PRPF38AQ8NAV1 312 aaKnown RBP10.02□□□□□ -0.81
TPM1-213ENST00000558400 SLAIN1Q8ND83 568 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 GMCL1P1Q8NEA9 526 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 STAG1Q8WVM7 1258 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 ESR2Q92731 530 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 NUDT12Q9BQG2 462 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 PAGR1Q9BTK6 254 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
TPM1-213ENST00000558400 TXNRD2Q9NNW7 524 aa10.02□□□□□ -0.81
TPM1-213ENST00000558400 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.81
TPM1-213ENST00000558400 PLIN4Q96Q06 1357 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 ATAD5Q96QE3 1844 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
TPM1-213ENST00000558400 XRCC5P13010 732 aaKnown RBP10.01□□□□□ -0.81
TPM1-213ENST00000558400 PRKCZQ05513 592 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 BMP2KLQ5H9B9 411 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 RRP12Q5JTH9 1297 aaKnown RBP10.01□□□□□ -0.81
TPM1-213ENST00000558400 KIAA1755Q5JYT7 1200 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 CASC1Q6TDU7 716 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 PLEKHH3Q7Z736 793 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 IQCA1Q86XH1 822 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 CLEC10AQ8IUN9 316 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 SHCBP1Q8NEM2 672 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 CHURC1Q8WUH1 139 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 SOCS4Q8WXH5 440 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 KRT23Q9C075 422 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 CNNM2Q9H8M5 875 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 BIN2Q9UBW5 565 aaPredicted RBP10.01□□□□□ -0.81
TPM1-213ENST00000558400 FEM1BQ9UK73 627 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 GJD2Q9UKL4 321 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 ADAMTS5Q9UNA0 930 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 STX8Q9UNK0 236 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 IVNS1ABPQ9Y6Y0 642 aa10.01□□□□□ -0.81
TPM1-213ENST00000558400 PTPRFP10586 1907 aa10□□□□□ -0.81
TPM1-213ENST00000558400 SGSM2O43147 1006 aa10□□□□□ -0.81
TPM1-213ENST00000558400 ADCY3O60266 1144 aa10□□□□□ -0.81
TPM1-213ENST00000558400 PLA2G6O60733 806 aa10□□□□□ -0.81
TPM1-213ENST00000558400 ECM2O94769 699 aaPredicted RBP10□□□□□ -0.81
TPM1-213ENST00000558400 SLC25A27O95847 323 aa10□□□□□ -0.81
TPM1-213ENST00000558400 NDUFB10O96000 172 aa10□□□□□ -0.81
TPM1-213ENST00000558400 TOP1P11387 765 aaKnown RBP10□□□□□ -0.81
TPM1-213ENST00000558400 BMP3P12645 472 aa10□□□□□ -0.81
TPM1-213ENST00000558400 COPB2P35606 906 aa10□□□□□ -0.81
TPM1-213ENST00000558400 NOVP48745 357 aa10□□□□□ -0.81
TPM1-213ENST00000558400 HAND2P61296 217 aa10□□□□□ -0.81
TPM1-213ENST00000558400 TRDNQ13061 729 aa10□□□□□ -0.81
TPM1-213ENST00000558400 FAM83BQ5T0W9 1011 aa10□□□□□ -0.81
TPM1-213ENST00000558400 SLFN13Q68D06 897 aa10□□□□□ -0.81
TPM1-213ENST00000558400 RCSD1Q6JBY9 416 aa10□□□□□ -0.81
TPM1-213ENST00000558400 DGKHQ86XP1 1220 aa10□□□□□ -0.81
TPM1-213ENST00000558400 GMCL1Q96IK5 515 aa10□□□□□ -0.81
TPM1-213ENST00000558400 ZNF333Q96JL9 665 aa10□□□□□ -0.81
TPM1-213ENST00000558400 SLF1Q9BQI6 1058 aa10□□□□□ -0.81
TPM1-213ENST00000558400 SPATC1LQ9H0A9 340 aa10□□□□□ -0.81
TPM1-213ENST00000558400 MROH8Q9H579 483 aa10□□□□□ -0.81
TPM1-213ENST00000558400 INCENPQ9NQS7 918 aa10□□□□□ -0.81
TPM1-213ENST00000558400 IL17RBQ9NRM6 502 aa10□□□□□ -0.81
TPM1-213ENST00000558400 PPP4R2Q9NY27 417 aa10□□□□□ -0.81
TPM1-213ENST00000558400 SLC5A4Q9NY91 659 aa10□□□□□ -0.81
TPM1-213ENST00000558400 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
TPM1-213ENST00000558400 GABRQQ9UN88 632 aa10□□□□□ -0.81
TPM1-213ENST00000558400 CTDP1Q9Y5B0 961 aaPredicted RBP10□□□□□ -0.81
TPM1-213ENST00000558400 COL6A3P12111 3177 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 SLC15A5A6NIM6 579 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 VWA5AO00534 786 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 ZBED4O75132 1171 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 CNMDO75829 334 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 EN2P19622 333 aaPredicted RBP9.99□□□□□ -0.81
TPM1-213ENST00000558400 STAT3P40763 770 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 RGS2P41220 211 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 SLC1A4P43007 532 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
TPM1-213ENST00000558400 POTEEQ6S8J3 1075 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 GPR142Q7Z601 462 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 FAM160B2Q86V87 743 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 ABRAQ8N0Z2 381 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 NKX2-3Q8TAU0 364 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 MAP4K1Q92918 833 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 PORCNQ9H237 461 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 BTBD7Q9P203 1132 aa9.99□□□□□ -0.81
TPM1-213ENST00000558400 LOC285556D6RIA3 1793 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 ATP2A1O14983 1001 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 PTPREP23469 700 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 MCCP23508 829 aa9.98□□□□□ -0.81
TPM1-213ENST00000558400 PLS1Q14651 629 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms