RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 PDE6AP16499 860 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 ADCYAP1R1P41586 468 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 SNX17Q15036 470 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 ZNF697Q5TEC3 545 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 TMED8Q6PL24 325 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 COL11A1P12107 1806 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 TRIM43BA6NCK2 446 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 KBTBD13C9JR72 458 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 SMIM22K7EJ46 135 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 LRRC41Q15345 812 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 SDR42E1Q8WUS8 393 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 FERMT2Q96AC1 680 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 TRIM43Q96BQ3 446 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 ATG4CQ96DT6 458 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 DYNLL2Q96FJ2 89 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 CRNKL1Q9BZJ0 848 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 PDLIM7Q9NR12 457 aa13.4□□□□□ -0.26
RABGGTA-204ENST00000558376 TTC28Q96AY4 2481 aa13.4□□□□□ -0.27
RABGGTA-204ENST00000558376 PRUNE2Q8WUY3 3088 aa13.4□□□□□ -0.27
RABGGTA-204ENST00000558376 SALL3Q9BXA9 1300 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 MX1P20591 662 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 PLS1Q14651 629 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 BMP2KLQ5H9B9 411 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 NCAPG2Q86XI2 1143 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 MAML3Q96JK9 1138 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 DCP1AQ9NPI6 582 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 EYSQ5T1H1 3165 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
RABGGTA-204ENST00000558376 AKR1B1P15121 316 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 ITGB8P26012 769 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 TLE2Q04725 743 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 SLFNL1Q499Z3 407 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 ABRAQ8N0Z2 381 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 SPICE1Q8N0Z3 855 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 MB21D1Q8N884 522 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 TTYH1Q9H313 450 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 MROH8Q9H579 483 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 PLXNA1Q9UIW2 1896 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 MYO9BQ13459 2157 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 PRKAB2O43741 272 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 FLOT1O75955 427 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 SDSP20132 328 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 TMEM132BQ14DG7 1078 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 ERC1Q8IUD2 1116 aa13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 CLASRPQ8N2M8 674 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-204ENST00000558376 GOLIM4O00461 696 aa13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 EPHB4P54760 987 aa13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 TTF1Q15361 905 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 MAFAQ8NHW3 353 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 MYLIPQ8WY64 445 aa13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 OSBPL3Q9H4L5 887 aa13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 ARMT1Q9H993 441 aa13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 SLC5A4Q9NY91 659 aa13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 PHF24Q9UPV7 400 aa13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 VCANP13611 3396 aa13.37□□□□□ -0.27
RABGGTA-204ENST00000558376 CYP2D7A0A087X1C5 515 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 FCER1AP12319 257 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 TAL1P17542 331 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 SMAD3P84022 425 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 C1orf53Q5VUE5 145 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 SWAP70Q9UH65 585 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 ADAMTS5Q9UNA0 930 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 PGK2P07205 417 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 FBXO28Q9NVF7 368 aa13.36□□□□□ -0.27
RABGGTA-204ENST00000558376 PGK1P00558 417 aa13.35□□□□□ -0.27
RABGGTA-204ENST00000558376 ICA1Q05084 483 aa13.35□□□□□ -0.27
RABGGTA-204ENST00000558376 ZNF792Q3KQV3 632 aa13.35□□□□□ -0.27
RABGGTA-204ENST00000558376 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.35□□□□□ -0.27
RABGGTA-204ENST00000558376 MMP19Q99542 508 aa13.35□□□□□ -0.27
RABGGTA-204ENST00000558376 XPNPEP3Q9NQH7 507 aa13.35□□□□□ -0.27
RABGGTA-204ENST00000558376 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-204ENST00000558376 SLC25A27O95847 323 aa13.34□□□□□ -0.27
RABGGTA-204ENST00000558376 CHGBP05060 677 aa13.34□□□□□ -0.27
RABGGTA-204ENST00000558376 CDK8P49336 464 aa13.34□□□□□ -0.27
RABGGTA-204ENST00000558376 RIOX2Q8IUF8 465 aa13.34□□□□□ -0.27
RABGGTA-204ENST00000558376 PI4K2BQ8TCG2 481 aa13.34□□□□□ -0.27
RABGGTA-204ENST00000558376 TACC3Q9Y6A5 838 aa13.34□□□□□ -0.27
RABGGTA-204ENST00000558376 CDH23Q9H251 3354 aa13.34□□□□□ -0.27
RABGGTA-204ENST00000558376 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 KIAA0355O15063 1070 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 MBD4O95243 580 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 ZNF865P0CJ78 1059 aaPredicted RBP13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 RARBP10826 455 aa13.33□□□□□ -0.27
RABGGTA-204ENST00000558376 EEF2P13639 858 aaKnown RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms