RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 CYP2D6P10635 497 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 MFSD10Q14728 455 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 MTFR1Q15390 333 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 Q3C1V9 767 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 DYNLL2Q96FJ2 89 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 NACAP1Q9BZK3 213 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 TXNRD2Q9NNW7 524 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 SALL3Q9BXA9 1300 aa12.1□□□□□ -0.47
USP3-207ENST00000558218 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
USP3-207ENST00000558218 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 GPAA1O43292 621 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 HMGCRP04035 888 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 CHGBP05060 677 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 INHAP05111 366 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 AKR1B1P15121 316 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 SLC44A5Q8NCS7 719 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 YTHDC1Q96MU7 727 aaKnown RBP12.09□□□□□ -0.47
USP3-207ENST00000558218 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 KRTAP3-2Q9BYR7 98 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 RPAP3Q9H6T3 665 aaPredicted RBP12.09□□□□□ -0.47
USP3-207ENST00000558218 TSHZ2Q9NRE2 1034 aa12.09□□□□□ -0.47
USP3-207ENST00000558218 MYH8P13535 1937 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 HTTP42858 3142 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 STRNO43815 780 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 ELNP15502 786 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 RGS2P41220 211 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 ICA1Q05084 483 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 ZYXQ15942 572 aaKnown RBP12.08□□□□□ -0.48
USP3-207ENST00000558218 ZMYM1Q5SVZ6 1142 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 MORN1Q5T089 497 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 POTEEQ6S8J3 1075 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 PLEKHH3Q7Z736 793 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 SMC5Q8IY18 1101 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
USP3-207ENST00000558218 USP6NLQ92738 828 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 FSD1Q9BTV5 496 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 UNC93B1Q9H1C4 597 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 VCPKMTQ9H867 229 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 MKNK2Q9HBH9 465 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 PAK6Q9NQU5 681 aaPredicted RBP12.08□□□□□ -0.48
USP3-207ENST00000558218 SYNPO2Q9UMS6 1093 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 RPTORQ8N122 1335 aa12.08□□□□□ -0.48
USP3-207ENST00000558218 ROBO3Q96MS0 1386 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 CYP2D7A0A087X1C5 515 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 SPDYE16A6NNV3 312 aaPredicted RBP12.07□□□□□ -0.48
USP3-207ENST00000558218 WDR46O15213 610 aaKnown RBP12.07□□□□□ -0.48
USP3-207ENST00000558218 MYCP01106 439 aaPredicted RBP12.07□□□□□ -0.48
USP3-207ENST00000558218 APPP05067 770 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 SLC3A2P08195 630 aaKnown RBP12.07□□□□□ -0.48
USP3-207ENST00000558218 PDE1AP54750 535 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 UBE2Q1Q7Z7E8 422 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 IFNL3Q8IZI9 196 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 ZNF444Q8N0Y2 327 aaPredicted RBP12.07□□□□□ -0.48
USP3-207ENST00000558218 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 OTUD7AQ8TE49 926 aaPredicted RBP12.07□□□□□ -0.48
USP3-207ENST00000558218 PAGR1Q9BTK6 254 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 NYAP2Q9P242 653 aa12.07□□□□□ -0.48
USP3-207ENST00000558218 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 TNRC18O15417 2968 aaPredicted RBP12.06□□□□□ -0.48
USP3-207ENST00000558218 CNMDO75829 334 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 HOXC6P09630 235 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
USP3-207ENST00000558218 RASA1P20936 1047 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 PTPREP23469 700 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 TDO2P48775 406 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 PDE4BQ07343 736 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 MAP3K21Q5TCX8 1036 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 MKL1Q969V6 931 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 SHISA4Q96DD7 197 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 HTATIP2Q9BUP3 242 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 PORCNQ9H237 461 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 HMX1Q9NP08 348 aaPredicted RBP12.06□□□□□ -0.48
USP3-207ENST00000558218 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 ADAMTS5Q9UNA0 930 aa12.06□□□□□ -0.48
USP3-207ENST00000558218 M0R2C6 588 aa12.05□□□□□ -0.48
USP3-207ENST00000558218 TFRCP02786 760 aaKnown RBP12.05□□□□□ -0.48
USP3-207ENST00000558218 CYP2B6P20813 491 aa12.05□□□□□ -0.48
USP3-207ENST00000558218 MAP2K5Q13163 448 aa12.05□□□□□ -0.48
USP3-207ENST00000558218 DEFB118Q96PH6 123 aa12.05□□□□□ -0.48
USP3-207ENST00000558218 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP3-207ENST00000558218 TANGO6Q9C0B7 1094 aa12.05□□□□□ -0.48
USP3-207ENST00000558218 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP3-207ENST00000558218 MROH8Q9H579 483 aa12.05□□□□□ -0.48
USP3-207ENST00000558218 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
USP3-207ENST00000558218 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
USP3-207ENST00000558218 IVNS1ABPQ9Y6Y0 642 aa12.05□□□□□ -0.48
USP3-207ENST00000558218 SMIM22K7EJ46 135 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 FLOT1O75955 427 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 SLC25A27O95847 323 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 ALX1Q15699 326 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms