RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 AFMP43652 599 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 HK2P52789 917 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 PMS1P54277 932 aaKnown RBP5.5□□□□□ -1.53
SPG11-206ENST00000558093 BBS9Q3SYG4 887 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 UNC5AQ6ZN44 842 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 FLAD1Q8NFF5 587 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 ENOX1Q8TC92 643 aaKnown RBP5.5□□□□□ -1.53
SPG11-206ENST00000558093 SYTL5Q8TDW5 730 aaPredicted RBP5.5□□□□□ -1.53
SPG11-206ENST00000558093 FAM168AQ92567 244 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 SMARCC1Q92922 1105 aaPredicted RBP5.5□□□□□ -1.53
SPG11-206ENST00000558093 DSCC1Q9BVC3 393 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 HDAC8Q9BY41 377 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 PRDM14Q9GZV8 571 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 CTNND2Q9UQB3 1225 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 RNF114Q9Y508 228 aa5.5□□□□□ -1.53
SPG11-206ENST00000558093 DNAJC25-GNG10A0A024R161 153 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 C9IYK1 514 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 SIGLEC6O43699 453 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 TP53P04637 393 aaPredicted RBP5.49□□□□□ -1.53
SPG11-206ENST00000558093 SSBP05455 408 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPG11-206ENST00000558093 GDNFP39905 211 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 PCBP3P57721 371 aaKnown RBP5.49□□□□□ -1.53
SPG11-206ENST00000558093 AUHQ13825 339 aaKnown RBP5.49□□□□□ -1.53
SPG11-206ENST00000558093 ZYXQ15942 572 aaKnown RBP5.49□□□□□ -1.53
SPG11-206ENST00000558093 KCNMB1Q16558 191 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 RALGPS1Q5JS13 557 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 ZSWIM9Q86XI8 627 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 ZNF655Q8N720 491 aaPredicted RBP5.49□□□□□ -1.53
SPG11-206ENST00000558093 DAGLBQ8NCG7 672 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 DHX38Q92620 1227 aaKnown RBP5.49□□□□□ -1.53
SPG11-206ENST00000558093 ANAPC16Q96DE5 110 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 TCTN2Q96GX1 697 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 CHST7Q9NS84 486 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 GFOD1Q9NXC2 390 aa5.49□□□□□ -1.53
SPG11-206ENST00000558093 FKTNO75072 461 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 RPL10P27635 214 aaKnown RBP5.48□□□□□ -1.53
SPG11-206ENST00000558093 GIPRP48546 466 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 DUSP4Q13115 394 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 NOL9Q5SY16 702 aaKnown RBP5.48□□□□□ -1.53
SPG11-206ENST00000558093 DCAF15Q66K64 600 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 RNF111Q6ZNA4 994 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 C7orf61Q8IZ16 206 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 KIRREL1Q96J84 757 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 FOXP3Q9BZS1 431 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 ADAMTS10Q9H324 1103 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 TCFL5Q9UL49 500 aa5.48□□□□□ -1.53
SPG11-206ENST00000558093 SYPP08247 313 aa5.47□□□□□ -1.53
SPG11-206ENST00000558093 ATF4P18848 351 aaPredicted RBP5.47□□□□□ -1.53
SPG11-206ENST00000558093 GNPTABQ3T906 1256 aa5.47□□□□□ -1.53
SPG11-206ENST00000558093 CWF19L1Q69YN2 538 aaKnown RBP5.47□□□□□ -1.53
SPG11-206ENST00000558093 WAPLQ7Z5K2 1190 aa5.47□□□□□ -1.53
SPG11-206ENST00000558093 PPFIBP1Q86W92 1011 aa5.47□□□□□ -1.53
SPG11-206ENST00000558093 C19orf47Q8N9M1 422 aaKnown RBP5.47□□□□□ -1.53
SPG11-206ENST00000558093 SHDQ96IW2 340 aa5.47□□□□□ -1.53
SPG11-206ENST00000558093 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.47□□□□□ -1.53
SPG11-206ENST00000558093 PHAXQ9H814 394 aaKnown RBP5.47□□□□□ -1.53
SPG11-206ENST00000558093 ZMYM5Q9UJ78 669 aa5.47□□□□□ -1.53
SPG11-206ENST00000558093 MINPP1Q9UNW1 487 aa5.47□□□□□ -1.53
SPG11-206ENST00000558093 ITGA4P13612 1032 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 DNAJA1P31689 397 aaKnown RBP5.46□□□□□ -1.54
SPG11-206ENST00000558093 TEKQ02763 1124 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 TCEAL1Q15170 157 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 AXDND1Q5T1B0 1012 aaPredicted RBP5.46□□□□□ -1.54
SPG11-206ENST00000558093 CRTC3Q6UUV7 619 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 MPZL3Q6UWV2 235 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 OXR1Q8N573 874 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 ABHD4Q8TB40 342 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 MYLIPQ8WY64 445 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 C19orf73Q9NVV2 129 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 ZNF214Q9UL59 606 aaPredicted RBP5.46□□□□□ -1.54
SPG11-206ENST00000558093 MRVI1Q9Y6F6 885 aa5.46□□□□□ -1.54
SPG11-206ENST00000558093 A0A1W2PQH9 124 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 ZGLP1P0C6A0 271 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 SLC7A5Q01650 507 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 ARID5AQ03989 594 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 TMEM67Q5HYA8 995 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 LINC00116Q8NCU8 138 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 PDZD8Q8NEN9 1154 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 BRF1Q92994 677 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 TINF2Q9BSI4 451 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 GBP3Q9H0R5 595 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 PRR13Q9NZ81 148 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 PCDHB10Q9UN67 800 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 LTBP3Q9NS15 1303 aa5.45□□□□□ -1.54
SPG11-206ENST00000558093 FITM1A5D6W6 292 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 SHOXO15266 292 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 GSNP06396 782 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 GLI1P08151 1106 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 ENDOUP21128 410 aaKnown RBP5.44□□□□□ -1.54
SPG11-206ENST00000558093 TXKP42681 527 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 ERVFC1P60507 584 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 CHRNEQ04844 493 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 TNNI3KQ59H18 835 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 FYB2Q5VWT5 728 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 HEATR6Q6AI08 1181 aaKnown RBP5.44□□□□□ -1.54
SPG11-206ENST00000558093 VHLLQ6RSH7 139 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 USHBP1Q8N6Y0 703 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 FAM169BQ8N8A8 192 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 ANKS4BQ8N8V4 417 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 HAUS7Q99871 368 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms