RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 HOXC10Q9NYD6 342 aa29.99■■■□□ 2.39
SMAD6-202ENST00000557916 BCRP11274 1271 aa29.98■■■□□ 2.39
SMAD6-202ENST00000557916 BMP3P12645 472 aa29.98■■■□□ 2.39
SMAD6-202ENST00000557916 SP3Q02447 781 aa29.98■■■□□ 2.39
SMAD6-202ENST00000557916 TMEM67Q5HYA8 995 aa29.97■■■□□ 2.39
SMAD6-202ENST00000557916 ANKRD13CQ8N6S4 541 aa29.97■■■□□ 2.39
SMAD6-202ENST00000557916 PNMA1Q8ND90 353 aa29.97■■■□□ 2.39
SMAD6-202ENST00000557916 GTF3C2Q8WUA4 911 aaPredicted RBP29.97■■■□□ 2.39
SMAD6-202ENST00000557916 MTA3Q9BTC8 594 aa29.97■■■□□ 2.39
SMAD6-202ENST00000557916 ISY1Q9ULR0 285 aaKnown RBP29.97■■■□□ 2.39
SMAD6-202ENST00000557916 SPDYE16A6NNV3 312 aaPredicted RBP29.96■■■□□ 2.39
SMAD6-202ENST00000557916 DSG3P32926 999 aa29.96■■■□□ 2.39
SMAD6-202ENST00000557916 WTAPQ15007 396 aa29.96■■■□□ 2.39
SMAD6-202ENST00000557916 SAMD1Q6SPF0 538 aaPredicted RBP29.96■■■□□ 2.39
SMAD6-202ENST00000557916 IGDCC4Q8TDY8 1250 aa29.96■■■□□ 2.39
SMAD6-202ENST00000557916 DCAF4Q8WV16 495 aa29.96■■■□□ 2.39
SMAD6-202ENST00000557916 PRDM10Q9NQV6 1147 aa29.96■■■□□ 2.39
SMAD6-202ENST00000557916 FBXO28Q9NVF7 368 aa29.96■■■□□ 2.39
SMAD6-202ENST00000557916 LBX2Q6XYB7 198 aa29.96■■■□□ 2.39
SMAD6-202ENST00000557916 JAKMIP1Q96N16 626 aaKnown RBP29.96■■■□□ 2.39
SMAD6-202ENST00000557916 HMGB1P09429 215 aaKnown RBP29.95■■■□□ 2.38
SMAD6-202ENST00000557916 FAM110CQ1W6H9 321 aa29.95■■■□□ 2.38
SMAD6-202ENST00000557916 KCTD1Q719H9 257 aa29.95■■■□□ 2.38
SMAD6-202ENST00000557916 DHX32Q7L7V1 743 aaKnown RBP29.95■■■□□ 2.38
SMAD6-202ENST00000557916 RASGRP2Q7LDG7 609 aa29.95■■■□□ 2.38
SMAD6-202ENST00000557916 TMEM87BQ96K49 555 aa29.95■■■□□ 2.38
SMAD6-202ENST00000557916 RBPJLQ9UBG7 517 aa29.95■■■□□ 2.38
SMAD6-202ENST00000557916 FEM1BQ9UK73 627 aa29.95■■■□□ 2.38
SMAD6-202ENST00000557916 MYPNQ86TC9 1320 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 TMEM232C9JQI7 657 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 CCDC96Q2M329 555 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 POTEEQ6S8J3 1075 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 ATG4CQ96DT6 458 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 SLF1Q9BQI6 1058 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 PAGR1Q9BTK6 254 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 TXNRD2Q9NNW7 524 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 PPP1R9AQ9ULJ8 1098 aa29.94■■■□□ 2.38
SMAD6-202ENST00000557916 PDHBP11177 359 aa29.93■■■□□ 2.38
SMAD6-202ENST00000557916 PSMA5P28066 241 aa29.93■■■□□ 2.38
SMAD6-202ENST00000557916 EXOSC10Q01780 885 aaKnown RBP29.93■■■□□ 2.38
SMAD6-202ENST00000557916 LRRC2Q9BYS8 371 aa29.93■■■□□ 2.38
SMAD6-202ENST00000557916 SENP2Q9HC62 589 aa29.93■■■□□ 2.38
SMAD6-202ENST00000557916 GPHNQ9NQX3 736 aaPredicted RBP29.93■■■□□ 2.38
SMAD6-202ENST00000557916 MORF4L1Q9UBU8 362 aa29.93■■■□□ 2.38
SMAD6-202ENST00000557916 RABGAP1Q9Y3P9 1069 aa29.93■■■□□ 2.38
SMAD6-202ENST00000557916 SH2B2O14492 632 aaPredicted RBP29.92■■■□□ 2.38
SMAD6-202ENST00000557916 PEX10O60683 326 aa29.92■■■□□ 2.38
SMAD6-202ENST00000557916 SNHG28P0DPA3 235 aa29.92■■■□□ 2.38
SMAD6-202ENST00000557916 PRPF38AQ8NAV1 312 aaKnown RBP29.92■■■□□ 2.38
SMAD6-202ENST00000557916 GPRC5AQ8NFJ5 357 aa29.92■■■□□ 2.38
SMAD6-202ENST00000557916 ERO1AQ96HE7 468 aa29.92■■■□□ 2.38
SMAD6-202ENST00000557916 LY9Q9HBG7 655 aa29.92■■■□□ 2.38
SMAD6-202ENST00000557916 WDR19Q8NEZ3 1342 aa29.92■■■□□ 2.38
SMAD6-202ENST00000557916 STAT2P52630 851 aa29.91■■■□□ 2.38
SMAD6-202ENST00000557916 LACTBP83111 547 aaPredicted RBP29.91■■■□□ 2.38
SMAD6-202ENST00000557916 IKQ13123 557 aaPredicted RBP29.91■■■□□ 2.38
SMAD6-202ENST00000557916 CD99L2Q8TCZ2 262 aa29.91■■■□□ 2.38
SMAD6-202ENST00000557916 CHURC1Q8WUH1 139 aa29.91■■■□□ 2.38
SMAD6-202ENST00000557916 RLFQ13129 1914 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 CASP8AP2Q9UKL3 1982 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 CNMDO75829 334 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 KIF22Q14807 665 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 BLOC1S2Q6QNY1 142 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 FAM160B2Q86V87 743 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 TMTC2Q8N394 836 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 MB21D1Q8N884 522 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 KIFC2Q96AC6 838 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 TCEANC2Q96MN5 208 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 GPCPD1Q9NPB8 672 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 BTBD7Q9P203 1132 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 ADAMTS5Q9UNA0 930 aa29.9■■■□□ 2.38
SMAD6-202ENST00000557916 FRMPD2Q68DX3 1309 aaPredicted RBP29.9■■■□□ 2.38
SMAD6-202ENST00000557916 PLA2G6O60733 806 aa29.89■■■□□ 2.38
SMAD6-202ENST00000557916 CPA1P15085 419 aa29.89■■■□□ 2.38
SMAD6-202ENST00000557916 CASTP20810 708 aaKnown RBP29.89■■■□□ 2.38
SMAD6-202ENST00000557916 ERVK-9P63128 1117 aa29.89■■■□□ 2.38
SMAD6-202ENST00000557916 ERVK-24P63145 666 aa29.89■■■□□ 2.38
SMAD6-202ENST00000557916 ZNF543Q08ER8 600 aa29.89■■■□□ 2.38
SMAD6-202ENST00000557916 VWA5AO00534 786 aa29.88■■■□□ 2.37
SMAD6-202ENST00000557916 ECM2O94769 699 aaPredicted RBP29.88■■■□□ 2.37
SMAD6-202ENST00000557916 LIFRP42702 1097 aa29.88■■■□□ 2.37
SMAD6-202ENST00000557916 Q3C1V9 767 aa29.88■■■□□ 2.37
SMAD6-202ENST00000557916 NFXL1Q6ZNB6 911 aa29.88■■■□□ 2.37
SMAD6-202ENST00000557916 GPATCH4Q5T3I0 446 aaKnown RBP29.88■■■□□ 2.37
SMAD6-202ENST00000557916 TTBK2Q6IQ55 1244 aa29.88■■■□□ 2.37
SMAD6-202ENST00000557916 CATIPQ7Z7H3 387 aa29.88■■■□□ 2.37
SMAD6-202ENST00000557916 PARP14Q460N5 1801 aa29.87■■■□□ 2.37
SMAD6-202ENST00000557916 CCDC69A6NI79 296 aa29.87■■■□□ 2.37
SMAD6-202ENST00000557916 RPS6KB1P23443 525 aa29.87■■■□□ 2.37
SMAD6-202ENST00000557916 ANAPC15P60006 121 aa29.87■■■□□ 2.37
SMAD6-202ENST00000557916 TM6SF1Q9BZW5 370 aa29.87■■■□□ 2.37
SMAD6-202ENST00000557916 ARHGAP39Q9C0H5 1083 aa29.87■■■□□ 2.37
SMAD6-202ENST00000557916 PARP1P09874 1014 aaKnown RBP29.86■■■□□ 2.37
SMAD6-202ENST00000557916 GOLGA8HP0CJ92 632 aa29.86■■■□□ 2.37
SMAD6-202ENST00000557916 PSMC4P43686 418 aa29.86■■■□□ 2.37
SMAD6-202ENST00000557916 ARHGEF6Q15052 776 aa29.86■■■□□ 2.37
SMAD6-202ENST00000557916 BTNL9Q6UXG8 535 aa29.86■■■□□ 2.37
SMAD6-202ENST00000557916 ZSWIM6Q9HCJ5 1215 aa29.86■■■□□ 2.37
SMAD6-202ENST00000557916 CTDP1Q9Y5B0 961 aaPredicted RBP29.86■■■□□ 2.37
SMAD6-202ENST00000557916 ZBED4O75132 1171 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms