RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 MIGA1Q8NAN2 632 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 NELFBQ8WX92 580 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 VIPAS39Q9H9C1 493 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 MKRN1Q9UHC7 482 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 TRIM66O15016 1216 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 NDUFA10O95299 355 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 FUT2Q10981 343 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 MAP9Q49MG5 647 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 NOM1Q5C9Z4 860 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 ZNF658Q5TYW1 1059 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 GOLGA6L1Q8N7Z2 621 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 CTCFLQ8NI51 663 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 HAUS4Q9H6D7 363 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 ANAPC4Q9UJX5 808 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 GUCA1BQ9UMX6 200 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 NUP98P52948 1817 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 PLCH1Q4KWH8 1693 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 hCG_1642624A0A1W2PR95 340 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 LRRIQ3A6PVS8 624 aaPredicted RBP13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 PSMD14O00487 310 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 WNT7AO00755 349 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 UBXN1Q04323 297 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 PDXDC2PQ6P474 469 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 TNFRSF25Q93038 417 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 LRP2BPQ9P2M1 347 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 PHACTR2O75167 634 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 CALM1P0DP23 149 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 CALM2P0DP24 149 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 CALM3P0DP25 149 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 USP14P54578 494 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 IFIT1BQ5T764 474 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 ENAHQ8N8S7 591 aaPredicted RBP13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 OR8K1Q8NGG5 319 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 CHP1Q99653 195 aa13.31□□□□□ -0.28
VIPAS39-211ENST00000557658 H7C1D1 291 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 PIGBQ92521 554 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 ZBTB9Q96C00 473 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 FAM204AQ9H8W3 233 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 RSPH14Q9UHP6 348 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 IQSEC3Q9UPP2 1182 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 REXO2Q9Y3B8 237 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 SNAP23O00161 211 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 RPN1P04843 607 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 CYP7A1P22680 504 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 TRAPPC10P48553 1259 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 RPGRIP1Q96KN7 1286 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 LUC7L2Q9Y383 392 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 SAR1BQ9Y6B6 198 aa13.3□□□□□ -0.28
VIPAS39-211ENST00000557658 BCAMP50895 628 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 CKAP4Q07065 602 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 A0A1W2PQC6 194 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 TTC26A0AVF1 554 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 RNF40O75150 1001 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 PARP1P09874 1014 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 NPY5RQ15761 445 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 IQCA1Q86XH1 822 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 SDR42E1Q8WUS8 393 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 MTRQ99707 1265 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 TRIM10Q9UDY6 481 aa13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-211ENST00000557658 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 TARSL2A2RTX5 802 aaKnown RBP13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 ERVV-1B6SEH8 477 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 KRT83P78385 493 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 CCDC122Q5T0U0 273 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 MB21D1Q8N884 522 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 AFAP1L1Q8TED9 768 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 LGALS16A8MUM7 142 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 ENC1O14682 589 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 DDAH1O94760 285 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 CYP19A1P11511 503 aaPredicted RBP13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 PRCPP42785 496 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 TROAPQ12815 778 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 PAPD7Q5XG87 772 aaKnown RBP13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 LRRC31Q6UY01 552 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 PIK3AP1Q6ZUJ8 805 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 MMS19Q96T76 1030 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 EFCC1Q9HA90 598 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 GDAQ9Y2T3 454 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 SOS2Q07890 1332 aaPredicted RBP13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 DUOX1Q9NRD9 1551 aa13.28□□□□□ -0.28
VIPAS39-211ENST00000557658 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 EEF1GP26641 437 aaKnown RBP13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 LONP1P36776 959 aaKnown RBP13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 NLRP5P59047 1200 aa13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 FOXR1Q6PIV2 292 aa13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 ZNF662Q6ZS27 426 aa13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 KIAA1328Q86T90 577 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms