RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 USP17L17D6RBQ6 530 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 USP17L19D6RCP7 530 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 USP17L20D6RJB6 530 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 ZNF213O14771 459 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 FMNL1O95466 1100 aaPredicted RBP9.87□□□□□ -0.83
PSEN1-223ENST00000557511 GNRH1P01148 92 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 CYP2C8P10632 490 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 HSPD1P10809 573 aaKnown RBP9.87□□□□□ -0.83
PSEN1-223ENST00000557511 AKR1B1P15121 316 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 USP17L24Q0WX57 530 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 KIAA1211Q6ZU35 1233 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 CD99L2Q8TCZ2 262 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 MCOLN1Q9GZU1 580 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 PPP4R2Q9NY27 417 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 ROBO3Q96MS0 1386 aa9.87□□□□□ -0.83
PSEN1-223ENST00000557511 RANBP6O60518 1105 aaKnown RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 PRDM1O75626 825 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 PCP11498 1178 aaKnown RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 GSPT1P15170 499 aaKnown RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 HOXA7P31268 230 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 PRMT2P55345 433 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 FCGRTP55899 365 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 JAG1P78504 1218 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 MOGSQ13724 837 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 IMMTQ16891 758 aaKnown RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 RRP12Q5JTH9 1297 aaKnown RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 C6orf132Q5T0Z8 1188 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 TREML2Q5T2D2 321 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 C17orf99Q6UX52 265 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 LPAR1Q92633 364 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 C12orf42Q96LP6 360 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 TANGO6Q9C0B7 1094 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 ASCC2Q9H1I8 757 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 R3HDMLQ9H3Y0 253 aa9.86□□□□□ -0.83
PSEN1-223ENST00000557511 ISY1Q9ULR0 285 aaKnown RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 CTDP1Q9Y5B0 961 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-223ENST00000557511 ZMYM6O95789 1325 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 CDK5RAP2Q96SN8 1893 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 FGAP02671 866 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 EEF2P13639 858 aaKnown RBP9.85□□□□□ -0.83
PSEN1-223ENST00000557511 RASA1P20936 1047 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 MLLT3P42568 568 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-223ENST00000557511 PSMC4P43686 418 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 NT5C2P49902 561 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 CCNA1P78396 465 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 LACTBP83111 547 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-223ENST00000557511 TFAP4Q01664 338 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 CTDSPL2Q05D32 466 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 SHROOM1Q2M3G4 852 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-223ENST00000557511 FBXO46Q6PJ61 603 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-223ENST00000557511 MFSD6Q6ZSS7 791 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 ZNF589Q86UQ0 364 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-223ENST00000557511 SPNS2Q8IVW8 549 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 ACER1Q8TDN7 264 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 COA7Q96BR5 231 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 DSCC1Q9BVC3 393 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 HOXC10Q9NYD6 342 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 NYAP2Q9P242 653 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 ANAPC4Q9UJX5 808 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 TMX2Q9Y320 296 aa9.85□□□□□ -0.83
PSEN1-223ENST00000557511 CCDC85CA6NKD9 419 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 TNPO2O14787 897 aaKnown RBP9.84□□□□□ -0.83
PSEN1-223ENST00000557511 WDR46O15213 610 aaKnown RBP9.84□□□□□ -0.83
PSEN1-223ENST00000557511 TTLL1O95922 423 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 VCAM1P19320 739 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 CHMLP26374 656 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 GUCY1A2P33402 732 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 HERVK_113P62684 666 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 TRDNQ13061 729 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 FAM110CQ1W6H9 321 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 CCDC178Q5BJE1 867 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 SMYD5Q6GMV2 418 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 ADGRD1Q6QNK2 874 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 CATSPERGQ6ZRH7 1159 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 OTOP1Q7RTM1 612 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 NBPF11Q86T75 865 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 ANKRD13CQ8N6S4 541 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 GPRC5AQ8NFJ5 357 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 ESR2Q92731 530 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 ABHD8Q96I13 439 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 PAGR1Q9BTK6 254 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 RPAP3Q9H6T3 665 aaPredicted RBP9.84□□□□□ -0.83
PSEN1-223ENST00000557511 VCPKMTQ9H867 229 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 CLIP2Q9UDT6 1046 aa9.84□□□□□ -0.83
PSEN1-223ENST00000557511 DDX60LQ5H9U9 1706 aaKnown RBP9.84□□□□□ -0.83
PSEN1-223ENST00000557511 ORC4O43929 436 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 FLOT1O75955 427 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 BCRP11274 1271 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 HAND2P61296 217 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 COG2Q14746 738 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 BMP2KLQ5H9B9 411 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 FAM47AQ5JRC9 791 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 AKNAD1Q5T1N1 836 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 RAET1EQ8TD07 263 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 P2RX7Q99572 595 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms