RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 XBP1P17861 261 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 INPP5BP32019 993 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 ECE1P42892 770 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 SLC1A4P43007 532 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 KLRC3Q07444 240 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 PFKFB3Q16875 520 aaPredicted RBP16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 EAPPQ56P03 285 aaPredicted RBP16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 SCYL3Q8IZE3 742 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 ACER1Q8TDN7 264 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 GMCL1Q96IK5 515 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 CHAMP1Q96JM3 812 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 SH2D4AQ9H788 454 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 DDX11L8A8MPP1 907 aa16.73■□□□□ 0.27
ARHGEF40-208ENST00000557498 KIF23Q02241 960 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF40-208ENST00000557498 MCTP1Q6DN14 999 aa16.73■□□□□ 0.27
ARHGEF40-208ENST00000557498 UBA5Q9GZZ9 404 aa16.73■□□□□ 0.27
ARHGEF40-208ENST00000557498 CPVLQ9H3G5 476 aa16.73■□□□□ 0.27
ARHGEF40-208ENST00000557498 RIOX1Q9H6W3 641 aa16.73■□□□□ 0.27
ARHGEF40-208ENST00000557498 GOPCQ9HD26 462 aa16.73■□□□□ 0.27
ARHGEF40-208ENST00000557498 GOLGB1Q14789 3259 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 OTOFQ9HC10 1997 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 RAD21O60216 631 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 MMP1P03956 469 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 FOXD4L6Q3SYB3 417 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 NOL9Q5SY16 702 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 FOXD4L3Q6VB84 417 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 KCTD1Q719H9 257 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 PIBF1Q8WXW3 757 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 SHISA4Q96DD7 197 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 KLRG1Q96E93 195 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 RRP36Q96EU6 259 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 CDCA5Q96FF9 252 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 VCPKMTQ9H867 229 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 VPS54Q9P1Q0 977 aa16.72■□□□□ 0.27
ARHGEF40-208ENST00000557498 PHIPQ8WWQ0 1821 aa16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 BMP3P12645 472 aa16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 DLK2Q6UY11 383 aa16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.277e-11■□□□□ 10
ARHGEF40-208ENST00000557498 FEZ1Q99689 392 aa16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 GLIS2Q9BZE0 524 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 SEC63Q9UGP8 760 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 ISY1Q9ULR0 285 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 KCNJ14Q9UNX9 436 aa16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 FZD1Q9UP38 647 aa16.71■□□□□ 0.27
ARHGEF40-208ENST00000557498 KIF28PB7ZC32 967 aa16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 USP2O75604 605 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 PTMSP20962 102 aa16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 DNM1Q05193 864 aaKnown RBP16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 BRAPQ7Z569 592 aa16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 PIGSQ96S52 555 aa16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 NUP88Q99567 741 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 PHF20Q9BVI0 1012 aa16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 SH3GLB2Q9NR46 395 aa16.7■□□□□ 0.26
ARHGEF40-208ENST00000557498 TCHHQ07283 1943 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 STXBP3O00186 592 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 VEGFAP15692 232 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 PTPRAP18433 802 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 NF2P35240 595 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 SLC16A2P36021 539 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 KRT85P78386 507 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 PRKG1Q13976 671 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 NBR1Q14596 966 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 KIAA1755Q5JYT7 1200 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 WWC2Q6AWC2 1192 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 HEATR3Q7Z4Q2 680 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 HOMER1Q86YM7 354 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 DIS3L2Q8IYB7 885 aaKnown RBP16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 ADGRF4Q8IZF3 695 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 SPICE1Q8N0Z3 855 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 FAM177A1Q8N128 213 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 GPKOWQ92917 476 aaPredicted RBP eCLIP16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 ZKSCAN4Q969J2 545 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 MTMR8Q96EF0 704 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 WDR18Q9BV38 432 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 JMJD4Q9H9V9 463 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 VAT1LQ9HCJ6 419 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 CNPY2Q9Y2B0 182 aa16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 BAZ2BQ9UIF8 2168 aaKnown RBP16.69■□□□□ 0.26
ARHGEF40-208ENST00000557498 hCG_1984214I3L0E3 225 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 U2AF2P26368 475 aaKnown RBP eCLIP16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 KRT2P35908 639 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 BTNL9Q6UXG8 535 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 ZNF713Q8N859 430 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 TMEM87AQ8NBN3 555 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 CCDC148Q8NFR7 591 aa16.68■□□□□ 0.26
ARHGEF40-208ENST00000557498 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms