RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 KBTBD4Q9NVX7 518 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 NCANO14594 1321 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 SLC22A31A6NKX4 558 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 USP2O75604 605 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-216ENST00000557496 PDE6BP35913 854 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 GALK1P51570 392 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 CWF19L2Q2TBE0 894 aaKnown RBP4.83□□□□□ -1.64
FOXN3-216ENST00000557496 ARSHQ5FYA8 562 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 NLRX1Q86UT6 975 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 USHBP1Q8N6Y0 703 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 DAGLBQ8NCG7 672 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 IRF2BPLQ9H1B7 796 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 ASCC2Q9H1I8 757 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-216ENST00000557496 GMIPQ9P107 970 aa4.83□□□□□ -1.64
FOXN3-216ENST00000557496 ROBO2Q9HCK4 1378 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 TMEM82A0PJX8 343 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 TLR3O15455 904 aaKnown RBP4.82□□□□□ -1.64
FOXN3-216ENST00000557496 ATE1O95260 518 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 RAG1P15918 1043 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 KIR2DL1P43626 348 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-216ENST00000557496 KIR2DL2P43627 348 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-216ENST00000557496 CHMP4BP1P59074 171 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 MLECQ14165 292 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 OVOS1Q6IE37 1185 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 TMC3Q7Z5M5 1100 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 ZNF655Q8N720 491 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-216ENST00000557496 TCTN2Q96GX1 697 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 MAP6Q96JE9 813 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.82□□□□□ -1.64
FOXN3-216ENST00000557496 BRMS1Q9HCU9 246 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 COPRSQ9NQ92 184 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 TCFL5Q9UL49 500 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 SUPT16HQ9Y5B9 1047 aaKnown RBP4.82□□□□□ -1.64
FOXN3-216ENST00000557496 PCDHB14Q9Y5E9 798 aa4.82□□□□□ -1.64
FOXN3-216ENST00000557496 OR14I1A6ND48 311 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 HRKO00198 91 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 PRRG2O14669 202 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 NRDCO43847 1150 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 GREM1O60565 184 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 ERCC3P19447 782 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 RPL10P27635 214 aaKnown RBP4.81□□□□□ -1.64
FOXN3-216ENST00000557496 POLR2BP30876 1174 aaKnown RBP4.81□□□□□ -1.64
FOXN3-216ENST00000557496 ITGAEP38570 1179 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 CRKP46108 304 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 SNW1Q13573 536 aaKnown RBP4.81□□□□□ -1.64
FOXN3-216ENST00000557496 NBPF9Q3BBW0 867 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 BBS9Q3SYG4 887 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 ADGRF1Q5T601 910 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 NBPF12Q5TAG4 269 aaPredicted RBP4.81□□□□□ -1.64
FOXN3-216ENST00000557496 CDCP2Q5VXM1 449 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 WAPLQ7Z5K2 1190 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 LINC00116Q8NCU8 138 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 SGPP1Q9BX95 441 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 FOXP3Q9BZS1 431 aa4.81□□□□□ -1.64
FOXN3-216ENST00000557496 B8ZZF3 427 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 PRAMEF1O95521 474 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 HOXA5P20719 270 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 EIF4A3P38919 411 aaKnown RBP4.8□□□□□ -1.64
FOXN3-216ENST00000557496 PCBP3P57721 371 aaKnown RBP4.8□□□□□ -1.64
FOXN3-216ENST00000557496 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 TMEM132EQ6IEE7 984 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 SIRT2Q8IXJ6 389 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 HHIPL1Q96JK4 782 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 CNNM2Q9H8M5 875 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 EHMT1Q9H9B1 1298 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 CRTAC1Q9NQ79 661 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 MBD1Q9UIS9 605 aaPredicted RBP4.8□□□□□ -1.64
FOXN3-216ENST00000557496 ZMYM5Q9UJ78 669 aa4.8□□□□□ -1.64
FOXN3-216ENST00000557496 CNOT6Q9ULM6 557 aaKnown RBP4.8□□□□□ -1.64
FOXN3-216ENST00000557496 SIGLEC6O43699 453 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 PDIA4P13667 645 aaKnown RBP4.79□□□□□ -1.64
FOXN3-216ENST00000557496 CTSWP56202 376 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 RAD51AP2Q09MP3 1159 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 SSPNQ14714 243 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 ZNF385BQ569K4 471 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 CEP128Q6ZU80 1094 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 ATG4CQ96DT6 458 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 C20orf173Q96LM9 149 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 PARD6AQ9NPB6 346 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 KCTD3Q9Y597 815 aa4.79□□□□□ -1.64
FOXN3-216ENST00000557496 RFXAPO00287 272 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 FKTNO75072 461 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 SYPP08247 313 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 CCNFP41002 786 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 SLC14A2Q15849 920 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 TCERG1LQ5VWI1 586 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 ZPBP2Q6X784 338 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 NLRC3Q7RTR2 1065 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 ZNF296Q8WUU4 475 aaPredicted RBP4.78□□□□□ -1.64
FOXN3-216ENST00000557496 FCRL2Q96LA5 508 aaPredicted RBP4.78□□□□□ -1.64
FOXN3-216ENST00000557496 KCNC2Q96PR1 638 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 PLCD4Q9BRC7 762 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 PRDM14Q9GZV8 571 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 ADAMTS1Q9UHI8 967 aa4.78□□□□□ -1.64
FOXN3-216ENST00000557496 SSU72P8A0A1W2PR75 194 aa4.77□□□□□ -1.65
FOXN3-216ENST00000557496 MEIS3P2A8K0S8 358 aa4.77□□□□□ -1.65
FOXN3-216ENST00000557496 CLEC3AO75596 197 aa4.77□□□□□ -1.65
FOXN3-216ENST00000557496 PNLIPP16233 465 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms