RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 NCOA7Q8NI08 942 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 MTMR7Q9Y216 660 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 BAZ2BQ9UIF8 2168 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 TNKSO95271 1327 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 MYPNQ86TC9 1320 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 SLC27A2O14975 620 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 PEX10O60683 326 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 REC8O95072 547 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 TOP1P11387 765 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 PSMC4P43686 418 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 NOVP48745 357 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 FCGRTP55899 365 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 ERVK-9P63128 1117 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 ERVK-24P63145 666 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 NECTIN1Q15223 517 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 RCSD1Q6JBY9 416 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 RASGRP2Q7LDG7 609 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 OTOP1Q7RTM1 612 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 ZSCAN10Q96SZ4 725 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 MCOLN1Q9GZU1 580 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 FBXO28Q9NVF7 368 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 ZSWIM5Q9P217 1185 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 MORF4L1Q9UBU8 362 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 MCM3APO60318 1980 aa12.45□□□□□ -0.42
HNRNPC-232ENST00000557442 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 BMP3P12645 472 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 CTGFP29279 349 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 SLC1A4P43007 532 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 CCDC178Q5BJE1 867 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 LBX2Q6XYB7 198 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 CYB5R4Q7L1T6 521 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 ENAHQ8N8S7 591 aaPredicted RBP12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 GPRC5AQ8NFJ5 357 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 GMCL1Q96IK5 515 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 TRIM47Q96LD4 638 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 TTC14Q96N46 770 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 SLF1Q9BQI6 1058 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 HOXC10Q9NYD6 342 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 RABGAP1Q9Y3P9 1069 aa12.44□□□□□ -0.42
HNRNPC-232ENST00000557442 TNPO2O14787 897 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 CNMDO75829 334 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 GNRH1P01148 92 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 MCCP23508 829 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 POTEEQ6S8J3 1075 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 DGKHQ86XP1 1220 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 MB21D2Q8IYB1 491 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 KAT14Q9H8E8 782 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 BTBD7Q9P203 1132 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 PPP1R9AQ9ULJ8 1098 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 FRMPD3Q5JV73 1810 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 LCTP09848 1927 aa12.43□□□□□ -0.42
HNRNPC-232ENST00000557442 ERICH2A1L162 156 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 ZKSCAN1P17029 563 aaPredicted RBP12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 STAT2P52630 851 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 CCNA1P78396 465 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 PLS1Q14651 629 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 SART3Q15020 963 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 IFIT1BQ5T764 474 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 FBXO46Q6PJ61 603 aaPredicted RBP12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 KCTD1Q719H9 257 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 CHST3Q7LGC8 479 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 MB21D1Q8N884 522 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 DCAF4Q8WV16 495 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 KIFC2Q96AC6 838 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 CWC22Q9HCG8 908 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 FEM1BQ9UK73 627 aa12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
HNRNPC-232ENST00000557442 TMEM232C9JQI7 657 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 VWA5AO00534 786 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 PDHBP11177 359 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 HOXD10P28358 340 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 Q3C1V9 767 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 WDR78Q5VTH9 848 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 PRPF38AQ8NAV1 312 aaKnown RBP12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 COA7Q96BR5 231 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 PORCNQ9H237 461 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 PTPN22Q9Y2R2 807 aa12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 KIAA0100Q14667 2235 aaKnown RBP12.41□□□□□ -0.42
HNRNPC-232ENST00000557442 PRC1O43663 620 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 MAPK4P31152 587 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 MCM5P33992 734 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 HSPA4P34932 840 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 PRMT2P55345 433 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 ANTXR2P58335 489 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 PRKCZQ05513 592 aa12.4□□□□□ -0.42
HNRNPC-232ENST00000557442 KRT32Q14532 448 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms