RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PRKCZQ05513 592 aa14.73□□□□□ -0.05
SLIRP-209ENST00000557342 Q3C1V9 767 aa14.73□□□□□ -0.05
SLIRP-209ENST00000557342 SLFN13Q68D06 897 aa14.73□□□□□ -0.05
SLIRP-209ENST00000557342 IQCA1Q86XH1 822 aa14.73□□□□□ -0.05
SLIRP-209ENST00000557342 TTC14Q96N46 770 aa14.73□□□□□ -0.05
SLIRP-209ENST00000557342 ESYT1Q9BSJ8 1104 aa14.73□□□□□ -0.05
SLIRP-209ENST00000557342 CWC22Q9HCG8 908 aaKnown RBP14.73□□□□□ -0.05
SLIRP-209ENST00000557342 RBBP6Q7Z6E9 1792 aaKnown RBP14.73□□□□□ -0.05
SLIRP-209ENST00000557342 NEDD4P46934 1319 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 NMT2O60551 498 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 TOP1P11387 765 aaKnown RBP14.72□□□□□ -0.05
SLIRP-209ENST00000557342 FLT3LGP49771 235 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 TRDNQ13061 729 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 IRF5Q13568 498 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 SLAIN1Q8ND83 568 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 MAP4K1Q92918 833 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 ARMC5Q96C12 935 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 SLF1Q9BQI6 1058 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 BTBD7Q9P203 1132 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 FEM1BQ9UK73 627 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 PPP1R9AQ9ULJ8 1098 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 GABRQQ9UN88 632 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 ADAMTS5Q9UNA0 930 aa14.72□□□□□ -0.05
SLIRP-209ENST00000557342 ZNFX1Q9P2E3 1918 aaKnown RBP14.72□□□□□ -0.05
SLIRP-209ENST00000557342 B4E1Z4 1266 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 PEX10O60683 326 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 CDC45O75419 566 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 BMP3P12645 472 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 GRK4P32298 578 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
SLIRP-209ENST00000557342 GPR142Q7Z601 462 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 PLEKHH3Q7Z736 793 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 PRPF38AQ8NAV1 312 aaKnown RBP14.71□□□□□ -0.05
SLIRP-209ENST00000557342 SOCS4Q8WXH5 440 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 ATG4CQ96DT6 458 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 GMCL1Q96IK5 515 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 NUP88Q99567 741 aaPredicted RBP14.71□□□□□ -0.05
SLIRP-209ENST00000557342 NUDT12Q9BQG2 462 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 SPATC1LQ9H0A9 340 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 FBXO28Q9NVF7 368 aa14.71□□□□□ -0.05
SLIRP-209ENST00000557342 VWA5AO00534 786 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 KDM4AO75164 1064 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 CYP21A2P08686 494 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 SLC1A4P43007 532 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 FAM160B2Q86V87 743 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 DGKHQ86XP1 1220 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 SHCBP1Q8NEM2 672 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 PXYLP1Q8TE99 480 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 CHURC1Q8WUH1 139 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 PORCNQ9H237 461 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 GJD2Q9UKL4 321 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 ISY1Q9ULR0 285 aaKnown RBP14.7□□□□□ -0.06
SLIRP-209ENST00000557342 CTDP1Q9Y5B0 961 aaPredicted RBP14.7□□□□□ -0.06
SLIRP-209ENST00000557342 RBM8AQ9Y5S9 174 aaKnown RBP14.7□□□□□ -0.06
SLIRP-209ENST00000557342 IVNS1ABPQ9Y6Y0 642 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 ZNF236Q9UL36 1845 aa14.7□□□□□ -0.06
SLIRP-209ENST00000557342 ADCY3O60266 1144 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 PLA2G6O60733 806 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 SLC25A27O95847 323 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 FDX1P10109 184 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 COPB2P35606 906 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 STAT2P52630 851 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 UBXN2AP68543 259 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 PLS1Q14651 629 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 WDR78Q5VTH9 848 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 RCSD1Q6JBY9 416 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 DCAF4Q8WV16 495 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 ZNF333Q96JL9 665 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 TMEM47Q9BQJ4 181 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 MOV10L1Q9BXT6 1211 aaKnown RBP14.69□□□□□ -0.06
SLIRP-209ENST00000557342 LSG1Q9H089 658 aaKnown RBP14.69□□□□□ -0.06
SLIRP-209ENST00000557342 MROH8Q9H579 483 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 ZSWIM5Q9P217 1185 aa14.69□□□□□ -0.06
SLIRP-209ENST00000557342 SLC15A5A6NIM6 579 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 STRNO43815 780 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 ZBED4O75132 1171 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 MCCP23508 829 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 RGS2P41220 211 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 IKQ13123 557 aaPredicted RBP14.68□□□□□ -0.06
SLIRP-209ENST00000557342 TMEM132BQ14DG7 1078 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 RALYLQ86SE5 291 aaKnown RBP14.68□□□□□ -0.06
SLIRP-209ENST00000557342 TRMT44Q8IYL2 757 aaKnown RBP14.68□□□□□ -0.06
SLIRP-209ENST00000557342 NCOA7Q8NI08 942 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 SH3TC2Q8TF17 1288 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 KIFC2Q96AC6 838 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 ZSCAN10Q96SZ4 725 aaPredicted RBP14.68□□□□□ -0.06
SLIRP-209ENST00000557342 ZKSCAN3Q9BRR0 538 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 UBAC1Q9BSL1 405 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 TMEM106CQ9BVX2 250 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 ANO2Q9NQ90 1003 aa14.68□□□□□ -0.06
SLIRP-209ENST00000557342 BIN2Q9UBW5 565 aaPredicted RBP14.68□□□□□ -0.06
SLIRP-209ENST00000557342 PLXNA1Q9UIW2 1896 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 TMEM232C9JQI7 657 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 XRCC5P13010 732 aaKnown RBP14.67□□□□□ -0.06
SLIRP-209ENST00000557342 ERCC3P19447 782 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 PTPREP23469 700 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 STAT3P40763 770 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 CCDC96Q2M329 555 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 MORN1Q5T089 497 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms