RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 GK5Q6ZS86 529 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 METTL16Q86W50 562 aaKnown RBP6.08□□□□□ -1.44
CHD8-212ENST00000557329 NT5DC4Q86YG4 428 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 RBBP8NLQ8NC74 664 aaPredicted RBP6.08□□□□□ -1.44
CHD8-212ENST00000557329 FBXO27Q8NI29 283 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 PI4K2BQ8TCG2 481 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 RASGRP4Q8TDF6 673 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 SYTL4Q96C24 671 aaPredicted RBP6.08□□□□□ -1.44
CHD8-212ENST00000557329 EAF1Q96JC9 268 aaPredicted RBP6.08□□□□□ -1.44
CHD8-212ENST00000557329 FERD3LQ96RJ6 166 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 CRBNQ96SW2 442 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 TM9SF2Q99805 663 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 GPR62Q9BZJ7 368 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 KIAA1522Q9P206 1035 aaPredicted RBP6.08□□□□□ -1.44
CHD8-212ENST00000557329 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.08□□□□□ -1.44
CHD8-212ENST00000557329 SLC12A7Q9Y666 1083 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 CHURC1-FNTBB4DL54 471 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 TNFRSF10CO14798 259 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 C8AP07357 584 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 CRKP46108 304 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 CEBPAP49715 358 aaPredicted RBP6.07□□□□□ -1.44
CHD8-212ENST00000557329 RBM10P98175 930 aaKnown RBP6.07□□□□□ -1.44
CHD8-212ENST00000557329 IKZF1Q13422 519 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 ZNF394Q53GI3 561 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 PPP1R13LQ8WUF5 828 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 SEC16BQ96JE7 1060 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 KREMEN1Q96MU8 473 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 DPH2Q9BQC3 489 aaPredicted RBP6.07□□□□□ -1.44
CHD8-212ENST00000557329 CCSER2Q9H7U1 834 aa6.07□□□□□ -1.44
CHD8-212ENST00000557329 UPK3BL1B0FP48 263 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 UPK3BL2E5RIL1 263 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 E9PSI1 815 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 ITGB5P18084 799 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 ENDOUP21128 410 aaKnown RBP6.06□□□□□ -1.44
CHD8-212ENST00000557329 GJA8P48165 433 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 HDLBPQ00341 1268 aaKnown RBP6.06□□□□□ -1.44
CHD8-212ENST00000557329 BBS9Q3SYG4 887 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 ARSHQ5FYA8 562 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 RIN3Q8TB24 985 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 SMARCC1Q92922 1105 aaPredicted RBP6.06□□□□□ -1.44
CHD8-212ENST00000557329 GPRASP2Q96D09 838 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 ATG4CQ96DT6 458 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 HSPA12BQ96MM6 686 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 SEMA3GQ9NS98 782 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 PRR13Q9NZ81 148 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 ST14Q9Y5Y6 855 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 WDR7Q9Y4E6 1490 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 RIMS1Q86UR5 1692 aaKnown RBP6.06□□□□□ -1.44
CHD8-212ENST00000557329 ZCCHC11Q5TAX3 1644 aaKnown RBP6.06□□□□□ -1.44
CHD8-212ENST00000557329 MADDQ8WXG6 1647 aa6.06□□□□□ -1.44
CHD8-212ENST00000557329 CLEC3AO75596 197 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 CD8BP10966 210 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 NME1P15531 152 aaKnown RBP6.05□□□□□ -1.44
CHD8-212ENST00000557329 TCF3P15923 654 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 RACK1P63244 317 aaKnown RBP6.05□□□□□ -1.44
CHD8-212ENST00000557329 CLCQ05315 142 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 TNK2Q07912 1038 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 PAK2Q13177 524 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 OVOS1Q6IE37 1185 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 NFXL1Q6ZNB6 911 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 ATG4DQ86TL0 474 aaPredicted RBP6.05□□□□□ -1.44
CHD8-212ENST00000557329 KIF2CQ99661 725 aa6.05□□□□□ -1.44
CHD8-212ENST00000557329 UNCXA6NJT0 531 aa6.04□□□□□ -1.44
CHD8-212ENST00000557329 SOX9P48436 509 aa6.04□□□□□ -1.44
CHD8-212ENST00000557329 ZP2Q05996 745 aa6.04□□□□□ -1.44
CHD8-212ENST00000557329 CDKAL1Q5VV42 579 aa6.04□□□□□ -1.44
CHD8-212ENST00000557329 DTWD2Q8NBA8 298 aa6.04□□□□□ -1.44
CHD8-212ENST00000557329 BAHD1Q8TBE0 780 aaPredicted RBP6.04□□□□□ -1.44
CHD8-212ENST00000557329 PCDHGB7Q9Y5F8 929 aa6.04□□□□□ -1.44
CHD8-212ENST00000557329 CARMIL1Q5VZK9 1371 aa6.04□□□□□ -1.44
CHD8-212ENST00000557329 UHRF1BP1LA0JNW5 1464 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 H3BS24 57 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 SRFP11831 508 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 BNIP3Q12983 259 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 CLEC16AQ2KHT3 1053 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 SPRED2Q7Z698 418 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 C19orf47Q8N9M1 422 aaKnown RBP6.03□□□□□ -1.44
CHD8-212ENST00000557329 DHX38Q92620 1227 aaKnown RBP6.03□□□□□ -1.44
CHD8-212ENST00000557329 UBE2FQ969M7 185 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 INPP5FQ9Y2H2 1132 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 ADAMTSL3P82987 1691 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 KDM5BQ9UGL1 1544 aa6.03□□□□□ -1.44
CHD8-212ENST00000557329 POGZQ7Z3K3 1410 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 KIF27Q86VH2 1401 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 PRR33A8MZF0 331 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 ERCC5P28715 1186 aaPredicted RBP6.02□□□□□ -1.45
CHD8-212ENST00000557329 RANGAP1P46060 587 aaPredicted RBP6.02□□□□□ -1.45
CHD8-212ENST00000557329 EIF6P56537 245 aaKnown RBP6.02□□□□□ -1.45
CHD8-212ENST00000557329 ZNF792Q3KQV3 632 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 TSPYL5Q86VY4 417 aaPredicted RBP6.02□□□□□ -1.45
CHD8-212ENST00000557329 VWCEQ96DN2 955 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 CAPN10Q9HC96 672 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 ZSWIM5Q9P217 1185 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 MAGI3Q5TCQ9 1506 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 BIVM-ERCC5R4GMW8 1640 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 BCORL1Q5H9F3 1711 aa6.02□□□□□ -1.45
CHD8-212ENST00000557329 UBOX5O94941 541 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 RAC2P15153 192 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms