RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ATF7P17544 494 aaPredicted RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 KARSQ15046 597 aaKnown RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 C10orf88Q9H8K7 445 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 KIRREL3Q8IZU9 778 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 STX18Q9P2W9 335 aaKnown RBP9.65□□□□□ -0.86
SYNE3-205ENST00000557275 ESRRBO95718 433 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
SYNE3-205ENST00000557275 RNF14Q9UBS8 474 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 GOLGA8JA6NMD2 632 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 STAM2O75886 525 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 RFX1P22670 979 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 RASSF7Q02833 373 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 DHX58Q96C10 678 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 CNPY2Q9Y2B0 182 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 OATP04181 439 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 HSPA6P17066 643 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 DNM2P50570 870 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 FGD4Q96M96 766 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 UBE4BO95155 1302 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 H0Y626 953 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 NR1I2O75469 434 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 HEXIM1O94992 359 aaKnown RBP9.65□□□□□ -0.86
SYNE3-205ENST00000557275 TRIM16O95361 564 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 C16orf72Q14CZ0 275 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 DNAJC17Q9NVM6 304 aaKnown RBP9.65□□□□□ -0.86
SYNE3-205ENST00000557275 TRMT112Q9UI30 125 aaKnown RBP9.65□□□□□ -0.86
SYNE3-205ENST00000557275 KRT75O95678 551 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 DHX38Q92620 1227 aaKnown RBP9.65□□□□□ -0.86
SYNE3-205ENST00000557275 MAP1BP46821 2468 aaKnown RBP9.65□□□□□ -0.86
SYNE3-205ENST00000557275 NR1H3Q13133 447 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 CNGA2Q16280 664 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 ANKRD35Q8N283 1001 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 POMGNT1Q8WZA1 660 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 KRT9P35527 623 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 DTX3LQ8TDB6 740 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 KRT82Q9NSB4 513 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 ABCF3Q9NUQ8 709 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 RAB20Q9NX57 234 aa9.65□□□□□ -0.86
SYNE3-205ENST00000557275 PRR23D1E9PI22 279 aaPredicted RBP9.65□□□□□ -0.87
SYNE3-205ENST00000557275 PRR23D2P0DMB1 279 aaPredicted RBP9.65□□□□□ -0.87
SYNE3-205ENST00000557275 TRIML2Q8N7C3 387 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 GINS4Q9BRT9 223 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 ING2Q9H160 280 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 SMCO2A6NFE2 343 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 M0QZ92 97 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 STAT1P42224 750 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 RAB14P61106 215 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 KRT81Q14533 505 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 NOP53Q9NZM5 478 aaKnown RBP9.65□□□□□ -0.87
SYNE3-205ENST00000557275 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.87
SYNE3-205ENST00000557275 RAB3GAP1Q15042 981 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 LZICQ8WZA0 190 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 A0A087WUV0 522 aaPredicted RBP9.64□□□□□ -0.87
SYNE3-205ENST00000557275 ECE1P42892 770 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.64□□□□□ -0.87
SYNE3-205ENST00000557275 ALDH1L1O75891 902 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 BRIP1Q9BX63 1249 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 KDM1AO60341 852 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 TBCCQ15814 346 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 ISM2Q6H9L7 571 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 ZNF263O14978 683 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 C10orf76Q5T2E6 689 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 ALS2CLQ60I27 953 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 RABGGTAQ92696 567 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 STAMBPL1Q96FJ0 436 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 PANK2Q9BZ23 570 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 CSGALNACT2Q8N6G5 542 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 TRAIPQ9BWF2 469 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 DEFA1P59665 94 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 DEFA3P59666 94 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 PHF21AQ96BD5 680 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 MIS18AQ9NYP9 233 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 SNX5Q9Y5X3 404 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 XRCC5P13010 732 aaKnown RBP9.64□□□□□ -0.87
SYNE3-205ENST00000557275 PLEKHM3Q6ZWE6 761 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 SESTD1Q86VW0 696 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 MAGEF1Q9HAY2 307 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 ZSCAN32Q9NX65 697 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 SUFUQ9UMX1 484 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 MCF2LO15068 1137 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 DEXIO95424 95 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 BPIFB4P59827 614 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 KLHL30Q0D2K2 578 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 KRT39Q6A163 491 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 DDX54Q8TDD1 881 aaKnown RBP9.64□□□□□ -0.87
SYNE3-205ENST00000557275 N4BP2L2Q92802 583 aaPredicted RBP9.64□□□□□ -0.87
SYNE3-205ENST00000557275 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 SPINK5Q9NQ38 1064 aaPredicted RBP9.64□□□□□ -0.87
SYNE3-205ENST00000557275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.64□□□□□ -0.87
SYNE3-205ENST00000557275 BACH1O14867 736 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 ACTN1P12814 892 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 ELF2Q15723 593 aa9.64□□□□□ -0.87
SYNE3-205ENST00000557275 OCM2P0CE71 109 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 OCMP0CE72 109 aaPredicted RBP9.63□□□□□ -0.87
SYNE3-205ENST00000557275 NBPF20Q3BBV1 942 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 BLOC1S6Q9UL45 172 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 KIAA2013Q8IYS2 634 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 STOML1Q9UBI4 398 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 NSD3Q9BZ95 1437 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms