RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.96□□□□□ -1.46
SRP54-212ENST00000556992 BHLHE22Q8NFJ8 381 aaPredicted RBP5.96□□□□□ -1.46
SRP54-212ENST00000556992 ELMO3Q96BJ8 720 aa5.96□□□□□ -1.46
SRP54-212ENST00000556992 MIPEPQ99797 713 aa5.96□□□□□ -1.46
SRP54-212ENST00000556992 NEURL4Q96JN8 1562 aa5.96□□□□□ -1.46
SRP54-212ENST00000556992 ABCC3O15438 1527 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 ZFYVE9O95405 1425 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 CDK8P49336 464 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 LLGL2Q6P1M3 1020 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 LILRA6Q6PI73 481 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 LRFN4Q6PJG9 635 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.95□□□□□ -1.46
SRP54-212ENST00000556992 ANKLE2Q86XL3 938 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 FAM9BQ8IZU0 186 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 PNISRQ8TF01 805 aaKnown RBP5.95□□□□□ -1.46
SRP54-212ENST00000556992 XAGE3Q8WTP9 111 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 BIN2Q9UBW5 565 aaPredicted RBP5.95□□□□□ -1.46
SRP54-212ENST00000556992 MAPK8IP1Q9UQF2 711 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 DEPDC5O75140 1603 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 MYOM2P54296 1465 aa5.95□□□□□ -1.46
SRP54-212ENST00000556992 MYBBP1AQ9BQG0 1328 aaKnown RBP5.95□□□□□ -1.46
SRP54-212ENST00000556992 CENPJQ9HC77 1338 aaPredicted RBP5.95□□□□□ -1.46
SRP54-212ENST00000556992 TET3O43151 1660 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 AGLP35573 1532 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 EFCAB6Q5THR3 1501 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 FRMPD1Q5SYB0 1578 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 KIDINS220Q9ULH0 1771 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 NPIPB6E9PJ23 425 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 FANCGO15287 622 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 LRIG2O94898 1065 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 TRIM37O94972 964 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 CBX7O95931 251 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 ERVFC1P60507 584 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 CCDC184Q52MB2 194 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 TMEM132EQ6IEE7 984 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 MFSD4AQ8N468 514 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 ZSCAN18Q8TBC5 510 aaPredicted RBP5.94□□□□□ -1.46
SRP54-212ENST00000556992 PPP1R16BQ96T49 567 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 OSBPL7Q9BZF2 842 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 ZMYM4Q5VZL5 1548 aa5.94□□□□□ -1.46
SRP54-212ENST00000556992 BRD4O60885 1362 aaPredicted RBP5.93□□□□□ -1.46
SRP54-212ENST00000556992 ZMYM3Q14202 1370 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 SPATA31D1Q6ZQQ2 1576 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 SOWAHDA6NJG2 315 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 WASH4PA8MWX3 477 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 CNGB1Q14028 1251 aaPredicted RBP5.93□□□□□ -1.46
SRP54-212ENST00000556992 SLBPQ14493 270 aaKnown RBP eCLIP5.93□□□□□ -1.46
SRP54-212ENST00000556992 DSC3Q14574 896 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 ENOX2Q16206 610 aaKnown RBP5.93□□□□□ -1.46
SRP54-212ENST00000556992 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 SFRP5Q5T4F7 317 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 PLPPR2Q96GM1 343 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 SLAMF8Q9P0V8 285 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 ST14Q9Y5Y6 855 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 CAPN6Q9Y6Q1 641 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 NRXN1Q9ULB1 1477 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 DIP2CQ9Y2E4 1556 aa5.93□□□□□ -1.46
SRP54-212ENST00000556992 MROH1Q8NDA8 1641 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 RNF17Q9BXT8 1623 aaKnown RBP5.92□□□□□ -1.46
SRP54-212ENST00000556992 NFIBO00712 420 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 GDNFP39905 211 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 RALGPS1Q5JS13 557 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 PCNX4Q63HM2 1172 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 FBXO15Q8NCQ5 510 aaPredicted RBP5.92□□□□□ -1.46
SRP54-212ENST00000556992 ZNF507Q8TCN5 953 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 UBE2FQ969M7 185 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 ARID3AQ99856 593 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 POGKQ9P215 609 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 ZSWIM5Q9P217 1185 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 WWC3Q9ULE0 1092 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 EVC2Q86UK5 1308 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 SBNO2Q9Y2G9 1366 aa5.92□□□□□ -1.46
SRP54-212ENST00000556992 PIK3C2GO75747 1445 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 DNAJC25-GNG10A0A024R161 153 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 MAPK1P28482 360 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 GSTT1P30711 240 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 MAPK8P45983 427 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 PLCB3Q01970 1234 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 CC2D1BQ5T0F9 858 aaKnown RBP5.91□□□□□ -1.46
SRP54-212ENST00000556992 NPAS4Q8IUM7 802 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 RETREG2Q8NC44 543 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 STK26Q9P289 416 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 DCTN4Q9UJW0 460 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 E9PCH4 1651 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 PARD3Q8TEW0 1356 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 NPC1L1Q9UHC9 1359 aa5.91□□□□□ -1.46
SRP54-212ENST00000556992 REREQ9P2R6 1566 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 CLTCL1P53675 1640 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 ABCA6Q8N139 1617 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 TRHRP34981 398 aaPredicted RBP5.9□□□□□ -1.46
SRP54-212ENST00000556992 BUD31P41223 144 aaPredicted RBP5.9□□□□□ -1.46
SRP54-212ENST00000556992 HK2P52789 917 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 ETF1P62495 437 aaKnown RBP5.9□□□□□ -1.46
SRP54-212ENST00000556992 PRAMEF13Q5VWM6 474 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 LETMD1Q6P1Q0 360 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 ATG14Q6ZNE5 492 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 TTC6Q86TZ1 520 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 KCT2Q8NC54 265 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 GAL3ST3Q96A11 431 aa5.9□□□□□ -1.46
SRP54-212ENST00000556992 ALPK1Q96QP1 1244 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms