RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 OLFML2BQ68BL8 750 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 AMOTL1Q8IY63 956 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 LENG1Q96BZ8 264 aaPredicted RBP17.79■□□□□ 0.44
CHD8-211ENST00000556833 HAUS7Q99871 368 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 PUS7LQ9H0K6 701 aaKnown RBP17.79■□□□□ 0.44
CHD8-211ENST00000556833 ATP8A2Q9NTI2 1148 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 PRKAG2Q9UGJ0 569 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 CUL9Q8IWT3 2517 aa17.79■□□□□ 0.44
CHD8-211ENST00000556833 MYH4Q9Y623 1939 aa17.78■□□□□ 0.44
CHD8-211ENST00000556833 ADCYAP1R1P41586 468 aa17.78■□□□□ 0.44
CHD8-211ENST00000556833 SLC4A3P48751 1232 aa17.78■□□□□ 0.44
CHD8-211ENST00000556833 FAM83BQ5T0W9 1011 aa17.78■□□□□ 0.44
CHD8-211ENST00000556833 C16orf86Q6ZW13 317 aa17.78■□□□□ 0.44
CHD8-211ENST00000556833 SHCBP1Q8NEM2 672 aa17.78■□□□□ 0.44
CHD8-211ENST00000556833 MAML3Q96JK9 1138 aa17.78■□□□□ 0.44
CHD8-211ENST00000556833 NUP88Q99567 741 aaPredicted RBP17.78■□□□□ 0.44
CHD8-211ENST00000556833 SH2D4AQ9H788 454 aa17.78■□□□□ 0.44
CHD8-211ENST00000556833 WDR46O15213 610 aaKnown RBP17.77■□□□□ 0.44
CHD8-211ENST00000556833 SEPT4O43236 478 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 STRNO43815 780 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 IGHA2P01877 340 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 FCER1AP12319 257 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 CTR9Q6PD62 1173 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 MB21D1Q8N884 522 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 ARRDC4Q8NCT1 418 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 DDRGK1Q96HY6 314 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 MMP19Q99542 508 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 MROH8Q9H579 483 aa17.77■□□□□ 0.44
CHD8-211ENST00000556833 GREB1LQ9C091 1923 aaPredicted RBP17.76■□□□□ 0.43
CHD8-211ENST00000556833 TAL1P17542 331 aaPredicted RBP17.76■□□□□ 0.43
CHD8-211ENST00000556833 LRRC41Q15345 812 aa17.76■□□□□ 0.43
CHD8-211ENST00000556833 SLC39A5Q6ZMH5 540 aa17.76■□□□□ 0.43
CHD8-211ENST00000556833 SLC5A4Q9NY91 659 aa17.76■□□□□ 0.43
CHD8-211ENST00000556833 MCM3APO60318 1980 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 PGK1P00558 417 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 C9orf50Q5SZB4 431 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 GPR153Q6NV75 609 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 SH3RF1Q7Z6J0 888 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 BADQ92934 168 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 CHMP4CQ96CF2 233 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 CCDC17Q96LX7 622 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 LRRCC1Q9C099 1032 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 STXBP5LQ9Y2K9 1186 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 UNC80Q8N2C7 3258 aa17.75■□□□□ 0.43
CHD8-211ENST00000556833 MINDY4BA8MYZ0 360 aa17.74■□□□□ 0.43
CHD8-211ENST00000556833 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
CHD8-211ENST00000556833 SHHQ15465 462 aa17.74■□□□□ 0.43
CHD8-211ENST00000556833 GOPCQ9HD26 462 aa17.74■□□□□ 0.43
CHD8-211ENST00000556833 XPNPEP3Q9NQH7 507 aa17.74■□□□□ 0.43
CHD8-211ENST00000556833 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
CHD8-211ENST00000556833 VWA5AO00534 786 aa17.73■□□□□ 0.43
CHD8-211ENST00000556833 STAT3P40763 770 aa17.73■□□□□ 0.43
CHD8-211ENST00000556833 KCTD2Q14681 263 aa17.73■□□□□ 0.43
CHD8-211ENST00000556833 GUCD1Q96NT3 240 aa17.73■□□□□ 0.43
CHD8-211ENST00000556833 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHD8-211ENST00000556833 KANSL2Q9H9L4 492 aa17.73■□□□□ 0.43
CHD8-211ENST00000556833 PDLIM7Q9NR12 457 aa17.73■□□□□ 0.43
CHD8-211ENST00000556833 PPP1R9AQ9ULJ8 1098 aa17.73■□□□□ 0.43
CHD8-211ENST00000556833 TRIM43BA6NCK2 446 aa17.72■□□□□ 0.43
CHD8-211ENST00000556833 PRDM1O75626 825 aa17.72■□□□□ 0.43
CHD8-211ENST00000556833 SLC25A27O95847 323 aa17.72■□□□□ 0.43
CHD8-211ENST00000556833 ZSCAN25Q6NSZ9 544 aa17.72■□□□□ 0.43
CHD8-211ENST00000556833 RIOX2Q8IUF8 465 aa17.72■□□□□ 0.43
CHD8-211ENST00000556833 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
CHD8-211ENST00000556833 TRIM43Q96BQ3 446 aaPredicted RBP17.72■□□□□ 0.43
CHD8-211ENST00000556833 ARPP21Q9UBL0 812 aaPredicted RBP17.72■□□□□ 0.43
CHD8-211ENST00000556833 PQBP1O60828 265 aaKnown RBP17.71■□□□□ 0.43
CHD8-211ENST00000556833 RARBP10826 455 aa17.71■□□□□ 0.43
CHD8-211ENST00000556833 RASA1P20936 1047 aa17.71■□□□□ 0.43
CHD8-211ENST00000556833 TLE2Q04725 743 aa17.71■□□□□ 0.43
CHD8-211ENST00000556833 CPXCR1Q8N123 301 aa17.71■□□□□ 0.43
CHD8-211ENST00000556833 OSBP2Q969R2 916 aa17.71■□□□□ 0.43
CHD8-211ENST00000556833 STRBPQ96SI9 672 aaKnown RBP17.71■□□□□ 0.43
CHD8-211ENST00000556833 TINF2Q9BSI4 451 aa17.71■□□□□ 0.43
CHD8-211ENST00000556833 MKNK2Q9HBH9 465 aa17.71■□□□□ 0.43
CHD8-211ENST00000556833 ZNF214Q9UL59 606 aaPredicted RBP17.71■□□□□ 0.43
CHD8-211ENST00000556833 ISY1Q9ULR0 285 aaKnown RBP17.71■□□□□ 0.43
CHD8-211ENST00000556833 EYSQ5T1H1 3165 aa17.71■□□□□ 0.43
CHD8-211ENST00000556833 GSG1L2A8MUP6 293 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 M0R2C6 588 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 NDUFB10O96000 172 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 ZNF792Q3KQV3 632 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 ZNF697Q5TEC3 545 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 SNRNP48Q6IEG0 339 aaKnown RBP17.7■□□□□ 0.42
CHD8-211ENST00000556833 LRRC47Q8N1G4 583 aaKnown RBP17.7■□□□□ 0.42
CHD8-211ENST00000556833 REPS2Q8NFH8 660 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 SLF1Q9BQI6 1058 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 EPB41L4AQ9HCS5 686 aaPredicted RBP17.7■□□□□ 0.42
CHD8-211ENST00000556833 ECHDC1Q9NTX5 307 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 ADAMTS5Q9UNA0 930 aa17.7■□□□□ 0.42
CHD8-211ENST00000556833 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
CHD8-211ENST00000556833 APPP05067 770 aa17.69■□□□□ 0.42
CHD8-211ENST00000556833 ITGB8P26012 769 aa17.69■□□□□ 0.42
CHD8-211ENST00000556833 TDO2P48775 406 aa17.69■□□□□ 0.42
CHD8-211ENST00000556833 IRX5P78411 483 aaPredicted RBP17.69■□□□□ 0.42
CHD8-211ENST00000556833 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
CHD8-211ENST00000556833 CLIP2Q9UDT6 1046 aa17.69■□□□□ 0.42
CHD8-211ENST00000556833 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
CHD8-211ENST00000556833 RIPK3Q9Y572 518 aa17.69■□□□□ 0.42
CHD8-211ENST00000556833 A0A1W2PQ45 241 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms