RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 MTHFSDQ2M296 383 aaKnown RBP7.56□□□□□ -1.2
TMEM260-212ENST00000556810 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
TMEM260-212ENST00000556810 GLYCTKQ8IVS8 523 aa7.56□□□□□ -1.2
TMEM260-212ENST00000556810 RAPGEF4Q8WZA2 1011 aa7.56□□□□□ -1.2
TMEM260-212ENST00000556810 TSR2Q969E8 191 aaKnown RBP7.56□□□□□ -1.2
TMEM260-212ENST00000556810 USP35Q9P2H5 1018 aa7.56□□□□□ -1.2
TMEM260-212ENST00000556810 TSPYL4Q9UJ04 414 aa7.56□□□□□ -1.2
TMEM260-212ENST00000556810 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
TMEM260-212ENST00000556810 SPG7Q9UQ90 795 aa7.56□□□□□ -1.2
TMEM260-212ENST00000556810 CPDO75976 1380 aa7.56□□□□□ -1.2
TMEM260-212ENST00000556810 CRYBG1Q9Y4K1 1723 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 PTPRCP08575 1304 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 OVOS2A0A0G2JMS6 1433 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 PATL2C9JE40 543 aaKnown RBP7.55□□□□□ -1.2
TMEM260-212ENST00000556810 HSP90AB1P08238 724 aaKnown RBP7.55□□□□□ -1.2
TMEM260-212ENST00000556810 YY1P25490 414 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 TEFQ10587 303 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 MVPQ14764 893 aaKnown RBP7.55□□□□□ -1.2
TMEM260-212ENST00000556810 GALNT12Q8IXK2 581 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 STK31Q9BXU1 1019 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 TMPRSS13Q9BYE2 586 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 RGPD5Q99666 1765 aa7.55□□□□□ -1.2
TMEM260-212ENST00000556810 A0A1W2PP55 124 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
TMEM260-212ENST00000556810 MED26O95402 600 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 HOXB7P09629 217 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 MFAP1P55081 439 aaKnown RBP7.54□□□□□ -1.2
TMEM260-212ENST00000556810 GSTM4Q03013 218 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 ECM1Q16610 540 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 CCDC30Q5VVM6 783 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 NBPF6Q5VWK0 638 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 C12orf50Q8NA57 414 aaPredicted RBP7.54□□□□□ -1.2
TMEM260-212ENST00000556810 SMG8Q8ND04 991 aaKnown RBP7.54□□□□□ -1.2
TMEM260-212ENST00000556810 SSH1Q8WYL5 1049 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 NBPF4Q96M43 638 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 SUGCTQ9HAC7 445 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 CYP4F12Q9HCS2 524 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 VIRMAQ69YN4 1812 aaKnown RBP7.54□□□□□ -1.2
TMEM260-212ENST00000556810 LMO7Q8WWI1 1683 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 CAMTA1Q9Y6Y1 1673 aa7.54□□□□□ -1.2
TMEM260-212ENST00000556810 A0A096LPE4 126 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 A0A1W2PPZ6 126 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
TMEM260-212ENST00000556810 DLGAP3O95886 979 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 MAP4P27816 1152 aaKnown RBP7.53□□□□□ -1.2
TMEM260-212ENST00000556810 GRIK1P39086 918 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 MCM10Q7L590 875 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 CCNJLQ8IV13 435 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 SHKBP1Q8TBC3 707 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 LIN7BQ9HAP6 207 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 NOB1Q9ULX3 412 aaKnown RBP7.53□□□□□ -1.2
TMEM260-212ENST00000556810 RGPD2P0DJD1 1756 aa7.53□□□□□ -1.2
TMEM260-212ENST00000556810 PRR19A6NJB7 356 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 KCNQ2O43526 872 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 NDUFB5O43674 189 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 EIF5BO60841 1220 aaKnown RBP7.52□□□□□ -1.21
TMEM260-212ENST00000556810 TIAF1O95411 115 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 ARHGAP4P98171 946 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 PCDH1Q08174 1060 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 DCTN1Q14203 1278 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 SGO2Q562F6 1265 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 EXOSC6Q5RKV6 272 aaKnown RBP7.52□□□□□ -1.21
TMEM260-212ENST00000556810 ZNF530Q6P9A1 599 aaPredicted RBP7.52□□□□□ -1.21
TMEM260-212ENST00000556810 INTS5Q6P9B9 1019 aaKnown RBP7.52□□□□□ -1.21
TMEM260-212ENST00000556810 IFNL2Q8IZJ0 200 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 TCF12Q99081 682 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 CLEC4MQ9H2X3 399 aaPredicted RBP7.52□□□□□ -1.21
TMEM260-212ENST00000556810 SPON1Q9HCB6 807 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 NLRP2Q9NX02 1062 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 PPP1R1BQ9UD71 204 aaPredicted RBP7.52□□□□□ -1.21
TMEM260-212ENST00000556810 HDAC5Q9UQL6 1122 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 CRB1P82279 1406 aa7.52□□□□□ -1.21
TMEM260-212ENST00000556810 COL18A1P39060 1754 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 RREB1Q92766 1687 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 TRIM27P14373 513 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 GRIA4P48058 902 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 SPRED3Q2MJR0 410 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 C20orf194Q5TEA3 1177 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 USPL1Q5W0Q7 1092 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 ITPRIPQ8IWB1 547 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 THUMPD2Q9BTF0 503 aaKnown RBP7.51□□□□□ -1.21
TMEM260-212ENST00000556810 BCL2L13Q9BXK5 485 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 NUP188Q5SRE5 1749 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 LRRC37A3O60309 1634 aa7.51□□□□□ -1.21
TMEM260-212ENST00000556810 PARP4Q9UKK3 1724 aaKnown RBP7.5□□□□□ -1.21
TMEM260-212ENST00000556810 CEMIPQ8WUJ3 1361 aa7.5□□□□□ -1.21
TMEM260-212ENST00000556810 BTBD11A6QL63 1104 aa7.5□□□□□ -1.21
TMEM260-212ENST00000556810 ELL2O00472 640 aaPredicted RBP7.5□□□□□ -1.21
TMEM260-212ENST00000556810 RNMTO43148 476 aaKnown RBP7.5□□□□□ -1.21
TMEM260-212ENST00000556810 CCT4P50991 539 aaKnown RBP7.5□□□□□ -1.21
TMEM260-212ENST00000556810 KIAA0319Q5VV43 1072 aa7.5□□□□□ -1.21
TMEM260-212ENST00000556810 C8orf58Q8NAV2 365 aa7.5□□□□□ -1.21
TMEM260-212ENST00000556810 PANK1Q8TE04 598 aa7.5□□□□□ -1.21
TMEM260-212ENST00000556810 FAM129BQ96TA1 746 aa7.5□□□□□ -1.21
TMEM260-212ENST00000556810 NRSN2Q9GZP1 204 aa7.5□□□□□ -1.21
TMEM260-212ENST00000556810 WDR17Q8IZU2 1322 aa7.5□□□□□ -1.21
TMEM260-212ENST00000556810 SCN11AQ9UI33 1791 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 WDR64B1ANS9 1081 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 DRD2P14416 443 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 SPINK2P20155 84 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms