RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 MB21D1Q8N884 522 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 REPS2Q8NFH8 660 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 RILPL2Q969X0 211 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-224ENST00000556737 SPATC1LQ9H0A9 340 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 CRISPLD2Q9H0B8 497 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 ZNF287Q9HBT7 754 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 HOXC10Q9NYD6 342 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 PPP1R9AQ9ULJ8 1098 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 SLC15A5A6NIM6 579 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 F5H6K3 240 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 SGPL1O95470 568 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 IGHA2P01877 340 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 HOXC6P09630 235 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 FGRP09769 529 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 HSPD1P10809 573 aaKnown RBP12.28□□□□□ -0.44
SHMT2-224ENST00000556737 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
SHMT2-224ENST00000556737 ZKSCAN1P17029 563 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-224ENST00000556737 SDSP20132 328 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 KLRC3Q07444 240 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 TMEM132BQ14DG7 1078 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 FAM47AQ5JRC9 791 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 ZNF444Q8N0Y2 327 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-224ENST00000556737 LRRC47Q8N1G4 583 aaKnown RBP12.28□□□□□ -0.44
SHMT2-224ENST00000556737 SHCBP1Q8NEM2 672 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 MKL1Q969V6 931 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 NBPF3Q9H094 633 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 INCENPQ9NQS7 918 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 FLRT1Q9NZU1 646 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 CLIP2Q9UDT6 1046 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 ZNF214Q9UL59 606 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-224ENST00000556737 SYNPO2Q9UMS6 1093 aa12.28□□□□□ -0.44
SHMT2-224ENST00000556737 VWA5AO00534 786 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 ORC4O43929 436 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 TTLL1O95922 423 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 FGAP02671 866 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 SLC3A2P08195 630 aaKnown RBP12.27□□□□□ -0.45
SHMT2-224ENST00000556737 TSPY3P0CV98 308 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 TSPY8P0CW00 308 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
SHMT2-224ENST00000556737 ERCC3P19447 782 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 NOVP48745 357 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 TFAP4Q01664 338 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 WDR78Q5VTH9 848 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
SHMT2-224ENST00000556737 GMCL1P1Q8NEA9 526 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 DEFB118Q96PH6 123 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.45
SHMT2-224ENST00000556737 NMT2O60551 498 aa12.26□□□□□ -0.45
SHMT2-224ENST00000556737 FARP2O94887 1054 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-224ENST00000556737 ADORA2AP29274 412 aa12.26□□□□□ -0.45
SHMT2-224ENST00000556737 CACNB2Q08289 660 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-224ENST00000556737 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-224ENST00000556737 RASGRP2Q7LDG7 609 aa12.26□□□□□ -0.45
SHMT2-224ENST00000556737 TBC1D10CQ8IV04 446 aa12.26□□□□□ -0.45
SHMT2-224ENST00000556737 CCAR1Q8IX12 1150 aaKnown RBP12.26□□□□□ -0.45
SHMT2-224ENST00000556737 IL25Q9H293 177 aa12.26□□□□□ -0.45
SHMT2-224ENST00000556737 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
SHMT2-224ENST00000556737 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
SHMT2-224ENST00000556737 RPTORQ8N122 1335 aa12.26□□□□□ -0.45
SHMT2-224ENST00000556737 RAD21O60216 631 aa12.25□□□□□ -0.45
SHMT2-224ENST00000556737 CCND3P30281 292 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-224ENST00000556737 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-224ENST00000556737 TTC22Q5TAA0 569 aa12.25□□□□□ -0.45
SHMT2-224ENST00000556737 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
SHMT2-224ENST00000556737 SLF1Q9BQI6 1058 aa12.25□□□□□ -0.45
SHMT2-224ENST00000556737 HMX1Q9NP08 348 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-224ENST00000556737 IVNS1ABPQ9Y6Y0 642 aa12.25□□□□□ -0.45
SHMT2-224ENST00000556737 ZNFX1Q9P2E3 1918 aaKnown RBP12.25□□□□□ -0.45
SHMT2-224ENST00000556737 TSPY2A6NKD2 308 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 LRRC37A2A6NM11 1700 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 COBLO75128 1261 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 NEDD4P46934 1319 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 HAND2P61296 217 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 PLS1Q14651 629 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
SHMT2-224ENST00000556737 NCAPG2Q86XI2 1143 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 ABRAQ8N0Z2 381 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 DIS3LQ8TF46 1054 aaKnown RBP12.24□□□□□ -0.45
SHMT2-224ENST00000556737 STAG1Q8WVM7 1258 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 GMCL1Q96IK5 515 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 MROH8Q9H579 483 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 DIAPH3Q9NSV4 1193 aa12.24□□□□□ -0.45
SHMT2-224ENST00000556737 HIP1O00291 1037 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 ATP2A1O14983 1001 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 STRNO43815 780 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 RANBP6O60518 1105 aaKnown RBP12.23□□□□□ -0.45
SHMT2-224ENST00000556737 SLC34A2O95436 690 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 SLC25A27O95847 323 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 CAPN2P17655 700 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 CYP2C19P33261 490 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 OLFML2BQ68BL8 750 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 SLFN13Q68D06 897 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 TRPV1Q8NER1 839 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms