RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 TREHO43280 583 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 USP2O75604 605 aaPredicted RBP5.28□□□□□ -1.56
RDH11-208ENST00000556692 BRD1O95696 1058 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 EFEMP2O95967 443 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 ZNF20P17024 532 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 GRK4P32298 578 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 NCKAP1LP55160 1127 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 TMC6Q7Z403 805 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 DTWD2Q8NBA8 298 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 DDX1Q92499 740 aaKnown RBP5.28□□□□□ -1.56
RDH11-208ENST00000556692 CEP44Q9C0F1 390 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 ZMYM5Q9UJ78 669 aa5.28□□□□□ -1.56
RDH11-208ENST00000556692 ITGB3P05106 788 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 PNLIPP16233 465 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 RPL10P27635 214 aaKnown RBP5.27□□□□□ -1.57
RDH11-208ENST00000556692 CNR2P34972 360 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 WIPI1Q5MNZ9 446 aaPredicted RBP5.27□□□□□ -1.57
RDH11-208ENST00000556692 RASIP1Q5U651 963 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 USP51Q70EK9 711 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 ERICH6Q7L0X2 663 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 C3orf58Q8NDZ4 430 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 LOXL4Q96JB6 756 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 C8orf49Q96NF6 230 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 SETDB2Q96T68 719 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 BAZ1AQ9NRL2 1556 aaPredicted RBP5.27□□□□□ -1.57
RDH11-208ENST00000556692 CYP8B1Q9UNU6 501 aa5.27□□□□□ -1.57
RDH11-208ENST00000556692 THOC2Q8NI27 1593 aaKnown RBP5.26□□□□□ -1.57
RDH11-208ENST00000556692 RSF1Q96T23 1441 aaPredicted RBP5.26□□□□□ -1.57
RDH11-208ENST00000556692 NRDCO43847 1150 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 MPOP05164 745 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 MAPK8P45983 427 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 PTPN11Q06124 597 aaPredicted RBP5.26□□□□□ -1.57
RDH11-208ENST00000556692 CEP128Q6ZU80 1094 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 LSRQ86X29 649 aaPredicted RBP5.26□□□□□ -1.57
RDH11-208ENST00000556692 ADGRG2Q8IZP9 1017 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 SPATA25Q9BR10 227 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 OSBPL7Q9BZF2 842 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 PCDHA5Q9Y5H7 936 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 SNCAIPQ9Y6H5 919 aa5.26□□□□□ -1.57
RDH11-208ENST00000556692 FBXO24O75426 580 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 TGM1P22735 817 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 ACVRL1P37023 503 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 LIMS1P48059 325 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 CAP1Q01518 475 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 TMEM62Q0P6H9 643 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 Q8N1X5 172 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 DNAJB8Q8NHS0 232 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 G6PC3Q9BUM1 346 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 KLHL14Q9P2G3 628 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 WWC3Q9ULE0 1092 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 CEP131Q9UPN4 1083 aa5.25□□□□□ -1.57
RDH11-208ENST00000556692 A0A1B0GTL3 188 aa5.24□□□□□ -1.57
RDH11-208ENST00000556692 GSTT1P30711 240 aa5.24□□□□□ -1.57
RDH11-208ENST00000556692 ERVFRD-1P60508 538 aa5.24□□□□□ -1.57
RDH11-208ENST00000556692 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.24□□□□□ -1.57
RDH11-208ENST00000556692 C1QTNF3Q9BXJ4 246 aa5.24□□□□□ -1.57
RDH11-208ENST00000556692 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
RDH11-208ENST00000556692 SUSD2Q9UGT4 822 aa5.24□□□□□ -1.57
RDH11-208ENST00000556692 DUSP10Q9Y6W6 482 aa5.24□□□□□ -1.57
RDH11-208ENST00000556692 FZD7O75084 574 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 KIR2DL1P43626 348 aaPredicted RBP5.23□□□□□ -1.57
RDH11-208ENST00000556692 KIR2DL2P43627 348 aaPredicted RBP5.23□□□□□ -1.57
RDH11-208ENST00000556692 CDK8P49336 464 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 RAB3GAP1Q15042 981 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 CLEC16AQ2KHT3 1053 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 LIPIQ6XZB0 460 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 WAPLQ7Z5K2 1190 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 SPRED1Q7Z699 444 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 ZSCAN29Q8IWY8 852 aaPredicted RBP5.23□□□□□ -1.57
RDH11-208ENST00000556692 MRPL41Q8IXM3 137 aaKnown RBP5.23□□□□□ -1.57
RDH11-208ENST00000556692 CHST13Q8NET6 341 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 SH3RF3Q8TEJ3 882 aaPredicted RBP5.23□□□□□ -1.57
RDH11-208ENST00000556692 TMEM87BQ96K49 555 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 TJP2Q9UDY2 1190 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 TIMELESSQ9UNS1 1208 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 IVNS1ABPQ9Y6Y0 642 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 PEG3Q9GZU2 1588 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 RIMBP3CA6NJZ7 1639 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 RIMBP3BA6NNM3 1639 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 RIMBP3Q9UFD9 1639 aa5.23□□□□□ -1.57
RDH11-208ENST00000556692 LRRN2O75325 713 aa5.22□□□□□ -1.57
RDH11-208ENST00000556692 PFKLP17858 780 aa5.22□□□□□ -1.57
RDH11-208ENST00000556692 ARL4AP40617 200 aa5.22□□□□□ -1.57
RDH11-208ENST00000556692 FMR1Q06787 632 aaKnown RBP eCLIP5.22□□□□□ -1.57
RDH11-208ENST00000556692 PCNX4Q63HM2 1172 aa5.22□□□□□ -1.57
RDH11-208ENST00000556692 SLC6A19Q695T7 634 aa5.22□□□□□ -1.57
RDH11-208ENST00000556692 FBF1Q8TES7 1133 aa5.22□□□□□ -1.57
RDH11-208ENST00000556692 SAMD11Q96NU1 681 aa5.22□□□□□ -1.57
RDH11-208ENST00000556692 RBM15Q96T37 977 aaKnown RBP eCLIP5.22□□□□□ -1.57
RDH11-208ENST00000556692 SMARCA4P51532 1647 aa5.22□□□□□ -1.57
RDH11-208ENST00000556692 NUDT19A8MXV4 375 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 PGRP06401 933 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 CELA3AP09093 270 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 ALG1LQ6GMV1 187 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 TTC9BQ8N6N2 239 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 MAP6Q96JE9 813 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 ASB16Q96NS5 453 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 SRCIN1Q9C0H9 1055 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 TACC3Q9Y6A5 838 aa5.21□□□□□ -1.58
RDH11-208ENST00000556692 TOP2AP11388 1531 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms