RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 H3BRB1 525 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 J3QW42 95 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 ALX3O95076 343 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 TGFB1P01137 390 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 IGHA2P01877 340 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 NCLP19338 710 aaKnown RBP7.38□□□□□ -1.23
CPSF2-205ENST00000556622 ANAPC15P60006 121 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 HYAL2Q12891 473 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 RAB3GAP1Q15042 981 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 SLC15A2Q16348 729 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 ELMSAN1Q6PJG2 1045 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 SKAP1Q86WV1 359 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 GLYCTKQ8IVS8 523 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 CEP120Q8N960 986 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 CHRDQ9H2X0 955 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 TUT1Q9H6E5 874 aaKnown RBP7.38□□□□□ -1.23
CPSF2-205ENST00000556622 CCNL1Q9UK58 526 aaPredicted RBP7.38□□□□□ -1.23
CPSF2-205ENST00000556622 TNS1Q9HBL0 1735 aaKnown RBP7.38□□□□□ -1.23
CPSF2-205ENST00000556622 ERC2O15083 957 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 RAB11FIP3O75154 756 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 DEAF1O75398 565 aaPredicted RBP7.37□□□□□ -1.23
CPSF2-205ENST00000556622 TNFRSF21O75509 655 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 GNAI2P04899 355 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 HOXB7P09629 217 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 MLLT1Q03111 559 aaPredicted RBP7.37□□□□□ -1.23
CPSF2-205ENST00000556622 AKAP4Q5JQC9 854 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 TTC22Q5TAA0 569 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 DTWD1Q8N5C7 304 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 SYAP1Q96A49 352 aaPredicted RBP7.37□□□□□ -1.23
CPSF2-205ENST00000556622 PLD4Q96BZ4 506 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 PHACTR3Q96KR7 559 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 FAM129BQ96TA1 746 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 TFCP2L1Q9NZI6 479 aa7.37□□□□□ -1.23
CPSF2-205ENST00000556622 FSD2A1L4K1 749 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 CYP2E1P05181 493 aaPredicted RBP7.36□□□□□ -1.23
CPSF2-205ENST00000556622 JAG1P78504 1218 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 MTHFSDQ2M296 383 aaKnown RBP7.36□□□□□ -1.23
CPSF2-205ENST00000556622 HS1BP3Q53T59 392 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 IGF2-ASQ6U949 168 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 HFE2Q6ZVN8 426 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 C1orf127Q8N9H9 656 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 TTC16Q8NEE8 873 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 NSUN5Q96P11 429 aaKnown RBP7.36□□□□□ -1.23
CPSF2-205ENST00000556622 SMG9Q9H0W8 520 aaKnown RBP7.36□□□□□ -1.23
CPSF2-205ENST00000556622 RBSNQ9H1K0 784 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 LGR6Q9HBX8 967 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 SPON1Q9HCB6 807 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 ASAP1Q9ULH1 1129 aa7.36□□□□□ -1.23
CPSF2-205ENST00000556622 NCAPD2Q15021 1401 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 A6NHS1 94 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 GNAT3A8MTJ3 354 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 PATL2C9JE40 543 aaKnown RBP7.35□□□□□ -1.23
CPSF2-205ENST00000556622 RNMTO43148 476 aaKnown RBP7.35□□□□□ -1.23
CPSF2-205ENST00000556622 LETM1O95202 739 aaPredicted RBP7.35□□□□□ -1.23
CPSF2-205ENST00000556622 ZBTB7AO95365 584 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 MBD3O95983 291 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 GHRHP01286 108 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 DDIT3P35638 169 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 CCDC173Q0VFZ6 552 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 KLHL40Q2TBA0 621 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 GLIPR1L2Q4G1C9 344 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 C8orf58Q8NAV2 365 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 INTS4Q96HW7 963 aaKnown RBP7.35□□□□□ -1.23
CPSF2-205ENST00000556622 RBCK1Q9BYM8 510 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 GRPEL1Q9HAV7 217 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 PPP1R1BQ9UD71 204 aaPredicted RBP7.35□□□□□ -1.23
CPSF2-205ENST00000556622 TSPYL4Q9UJ04 414 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 BRPF3Q9ULD4 1205 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 ATP6V1DQ9Y5K8 247 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 BTAF1O14981 1849 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 NHSQ6T4R5 1651 aa7.35□□□□□ -1.23
CPSF2-205ENST00000556622 KDRP35968 1356 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 NFKBIEO00221 500 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 EIF2AK2P19525 551 aaKnown RBP7.34□□□□□ -1.23
CPSF2-205ENST00000556622 CEP85Q6P2H3 762 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 SNX29Q8TEQ0 813 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 RUFY2Q8WXA3 655 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 CHMP4CQ96CF2 233 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 GPATCH3Q96I76 525 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 LRRCC1Q9C099 1032 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 PDGFDQ9GZP0 370 aaPredicted RBP7.34□□□□□ -1.23
CPSF2-205ENST00000556622 ZFYVE28Q9HCC9 887 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 TNNQ9UQP3 1299 aa7.34□□□□□ -1.23
CPSF2-205ENST00000556622 PALLDQ8WX93 1383 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 PXDNLA1KZ92 1463 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 HIP1O00291 1037 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 ELL2O00472 640 aaPredicted RBP7.33□□□□□ -1.24
CPSF2-205ENST00000556622 NDUFB5O43674 189 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 CES1P23141 567 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 MCM5P33992 734 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 TAF7Q15545 349 aaPredicted RBP7.33□□□□□ -1.24
CPSF2-205ENST00000556622 ZNF827Q17R98 1081 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 SLC51AQ86UW1 340 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 TNPO1Q92973 898 aaKnown RBP7.33□□□□□ -1.24
CPSF2-205ENST00000556622 ALKBH8Q96BT7 664 aaKnown RBP7.33□□□□□ -1.24
CPSF2-205ENST00000556622 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 USP26Q9BXU7 913 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 PBX4Q9BYU1 374 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 ADAM19Q9H013 955 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms