RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 LIFRP42702 1097 aa28.2■■■□□ 2.11
RCCD1-206ENST00000556618 TMTC2Q8N394 836 aa28.2■■■□□ 2.11
RCCD1-206ENST00000556618 CHMP4CQ96CF2 233 aa28.2■■■□□ 2.11
RCCD1-206ENST00000556618 TANGO6Q9C0B7 1094 aa28.2■■■□□ 2.11
RCCD1-206ENST00000556618 SAGE1Q9NXZ1 904 aa28.2■■■□□ 2.11
RCCD1-206ENST00000556618 CYP46A1Q9Y6A2 500 aa28.2■■■□□ 2.11
RCCD1-206ENST00000556618 RBM25P49756 843 aaKnown RBP28.2■■■□□ 2.1
RCCD1-206ENST00000556618 IRX3P78415 501 aaPredicted RBP28.2■■■□□ 2.1
RCCD1-206ENST00000556618 RASGRP2Q7LDG7 609 aa28.2■■■□□ 2.1
RCCD1-206ENST00000556618 PARK7Q99497 189 aaKnown RBP28.2■■■□□ 2.1
RCCD1-206ENST00000556618 CFHR5Q9BXR6 569 aa28.2■■■□□ 2.1
RCCD1-206ENST00000556618 BMP3P12645 472 aa28.19■■■□□ 2.1
RCCD1-206ENST00000556618 SLC1A4P43007 532 aa28.19■■■□□ 2.1
RCCD1-206ENST00000556618 CRHR2Q13324 411 aa28.19■■■□□ 2.1
RCCD1-206ENST00000556618 DCAF4Q8WV16 495 aa28.19■■■□□ 2.1
RCCD1-206ENST00000556618 P2RX7Q99572 595 aaKnown RBP28.19■■■□□ 2.1
RCCD1-206ENST00000556618 UPF3BQ9BZI7 483 aaKnown RBP28.19■■■□□ 2.1
RCCD1-206ENST00000556618 ZFYVE28Q9HCC9 887 aa28.19■■■□□ 2.1
RCCD1-206ENST00000556618 PDHBP11177 359 aa28.18■■■□□ 2.1
RCCD1-206ENST00000556618 TBC1D8O95759 1140 aa28.17■■■□□ 2.1
RCCD1-206ENST00000556618 SNHG28P0DPA3 235 aa28.17■■■□□ 2.1
RCCD1-206ENST00000556618 Q6ZUG5 572 aa28.17■■■□□ 2.1
RCCD1-206ENST00000556618 R3HDMLQ9H3Y0 253 aa28.17■■■□□ 2.1
RCCD1-206ENST00000556618 COG2Q14746 738 aa28.16■■■□□ 2.1
RCCD1-206ENST00000556618 SGMS1Q86VZ5 419 aa28.16■■■□□ 2.1
RCCD1-206ENST00000556618 FLOT1O75955 427 aa28.16■■■□□ 2.1
RCCD1-206ENST00000556618 NFXL1Q6ZNB6 911 aa28.16■■■□□ 2.1
RCCD1-206ENST00000556618 KCTD1Q719H9 257 aa28.16■■■□□ 2.1
RCCD1-206ENST00000556618 FBXL16Q8N461 479 aa28.16■■■□□ 2.1
RCCD1-206ENST00000556618 FBXO28Q9NVF7 368 aa28.16■■■□□ 2.1
RCCD1-206ENST00000556618 HOXC10Q9NYD6 342 aa28.16■■■□□ 2.1
RCCD1-206ENST00000556618 CCDC69A6NI79 296 aa28.15■■■□□ 2.1
RCCD1-206ENST00000556618 TLR2O60603 784 aa28.15■■■□□ 2.1
RCCD1-206ENST00000556618 HERVK_113P62684 666 aa28.15■■■□□ 2.1
RCCD1-206ENST00000556618 FGD1P98174 961 aa28.15■■■□□ 2.1
RCCD1-206ENST00000556618 CCDC96Q2M329 555 aa28.15■■■□□ 2.1
RCCD1-206ENST00000556618 CATIPQ7Z7H3 387 aa28.15■■■□□ 2.1
RCCD1-206ENST00000556618 SMCR8Q8TEV9 937 aaPredicted RBP28.15■■■□□ 2.1
RCCD1-206ENST00000556618 FEM1BQ9UK73 627 aa28.15■■■□□ 2.1
RCCD1-206ENST00000556618 ISY1Q9ULR0 285 aaKnown RBP28.15■■■□□ 2.1
RCCD1-206ENST00000556618 ADGRA2Q96PE1 1338 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 TMEM232C9JQI7 657 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 DSG3P32926 999 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 ZNF543Q08ER8 600 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 TROAPQ12815 778 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 ZNF654Q8IZM8 581 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 TBC1D32Q96NH3 1257 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 KIF2CQ99661 725 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 AGXT2Q9BYV1 514 aa28.14■■■□□ 2.1
RCCD1-206ENST00000556618 SPDYE16A6NNV3 312 aaPredicted RBP28.13■■■□□ 2.09
RCCD1-206ENST00000556618 PDRG1Q9NUG6 133 aa28.13■■■□□ 2.09
RCCD1-206ENST00000556618 FRMPD2Q68DX3 1309 aaPredicted RBP28.13■■■□□ 2.09
RCCD1-206ENST00000556618 PLA2G6O60733 806 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 POTEEQ6S8J3 1075 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 CHURC1Q8WUH1 139 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 BRF1Q92994 677 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 SLF1Q9BQI6 1058 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 GPCPD1Q9NPB8 672 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 TSKSQ9UJT2 592 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 PPP1R9AQ9ULJ8 1098 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 SLC12A7Q9Y666 1083 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 MYPNQ86TC9 1320 aa28.12■■■□□ 2.09
RCCD1-206ENST00000556618 GOLGA8HP0CJ92 632 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 HSPA1AP0DMV8 641 aaKnown RBP28.11■■■□□ 2.09
RCCD1-206ENST00000556618 HSPA1BP0DMV9 641 aaKnown RBP28.11■■■□□ 2.09
RCCD1-206ENST00000556618 GCLCP48506 637 aaPredicted RBP28.11■■■□□ 2.09
RCCD1-206ENST00000556618 STAT2P52630 851 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 GPATCH4Q5T3I0 446 aaKnown RBP28.11■■■□□ 2.09
RCCD1-206ENST00000556618 TTBK2Q6IQ55 1244 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 SAMD1Q6SPF0 538 aaPredicted RBP28.11■■■□□ 2.09
RCCD1-206ENST00000556618 C17orf99Q6UX52 265 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 LBX2Q6XYB7 198 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 PRPF38AQ8NAV1 312 aaKnown RBP28.11■■■□□ 2.09
RCCD1-206ENST00000556618 CPA4Q9UI42 421 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 BRPF3Q9ULD4 1205 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 COL11A1P12107 1806 aaPredicted RBP28.11■■■□□ 2.09
RCCD1-206ENST00000556618 DDAH1O94760 285 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 PARP1P09874 1014 aaKnown RBP28.11■■■□□ 2.09
RCCD1-206ENST00000556618 FAM160B2Q86V87 743 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 MYL10Q9BUA6 226 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 ADAMTS5Q9UNA0 930 aa28.11■■■□□ 2.09
RCCD1-206ENST00000556618 BAZ2BQ9UIF8 2168 aaKnown RBP28.1■■■□□ 2.09
RCCD1-206ENST00000556618 TOB2Q14106 344 aaPredicted RBP28.1■■■□□ 2.09
RCCD1-206ENST00000556618 GRM4Q14833 912 aa28.1■■■□□ 2.09
RCCD1-206ENST00000556618 ASPRV1Q53RT3 343 aa28.1■■■□□ 2.09
RCCD1-206ENST00000556618 BTNL9Q6UXG8 535 aa28.1■■■□□ 2.09
RCCD1-206ENST00000556618 GTF3C2Q8WUA4 911 aaPredicted RBP28.1■■■□□ 2.09
RCCD1-206ENST00000556618 NUP133Q8WUM0 1156 aa28.1■■■□□ 2.09
RCCD1-206ENST00000556618 ATG4CQ96DT6 458 aa28.1■■■□□ 2.09
RCCD1-206ENST00000556618 ALDH8A1Q9H2A2 487 aaPredicted RBP28.1■■■□□ 2.09
RCCD1-206ENST00000556618 RBPJLQ9UBG7 517 aa28.1■■■□□ 2.09
RCCD1-206ENST00000556618 FOXN1O15353 648 aa28.09■■■□□ 2.09
RCCD1-206ENST00000556618 BCRP11274 1271 aa28.09■■■□□ 2.09
RCCD1-206ENST00000556618 APOBRQ0VD83 1088 aa28.09■■■□□ 2.09
RCCD1-206ENST00000556618 IKQ13123 557 aaPredicted RBP28.09■■■□□ 2.09
RCCD1-206ENST00000556618 APOA5Q6Q788 366 aa28.09■■■□□ 2.09
RCCD1-206ENST00000556618 SYNE3Q6ZMZ3 975 aa28.09■■■□□ 2.09
RCCD1-206ENST00000556618 KIFC2Q96AC6 838 aa28.09■■■□□ 2.09
RCCD1-206ENST00000556618 MAP3K14Q99558 947 aa28.09■■■□□ 2.09
RCCD1-206ENST00000556618 MAD2L2Q9UI95 211 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms