RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 RXRAP19793 462 aa20.36■□□□□ 0.85
TUBB3-211ENST00000556536 TROAPQ12815 778 aa20.36■□□□□ 0.85
TUBB3-211ENST00000556536 CCL15Q16663 113 aa20.36■□□□□ 0.85
TUBB3-211ENST00000556536 TREML2Q5T2D2 321 aa20.36■□□□□ 0.85
TUBB3-211ENST00000556536 APOA5Q6Q788 366 aa20.36■□□□□ 0.85
TUBB3-211ENST00000556536 TPCN1Q9ULQ1 816 aa20.36■□□□□ 0.85
TUBB3-211ENST00000556536 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
TUBB3-211ENST00000556536 SNHG28P0DPA3 235 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 PDHBP11177 359 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 CETPP11597 493 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 EVCP57679 992 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 GPAT2Q6NUI2 795 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 NUP133Q8WUM0 1156 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 LPAR1Q92633 364 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 GMCL1Q96IK5 515 aa20.35■□□□□ 0.85
TUBB3-211ENST00000556536 NAP1L2Q9ULW6 460 aaPredicted RBP20.35■□□□□ 0.85
TUBB3-211ENST00000556536 TESPA1A2RU30 521 aaPredicted RBP20.34■□□□□ 0.85
TUBB3-211ENST00000556536 ST18O60284 1047 aa20.34■□□□□ 0.85
TUBB3-211ENST00000556536 DDAH1O94760 285 aa20.34■□□□□ 0.85
TUBB3-211ENST00000556536 KIF23Q02241 960 aaPredicted RBP20.34■□□□□ 0.85
TUBB3-211ENST00000556536 FAM83BQ5T0W9 1011 aa20.34■□□□□ 0.85
TUBB3-211ENST00000556536 FASTKD5Q7L8L6 764 aaKnown RBP20.34■□□□□ 0.85
TUBB3-211ENST00000556536 MICU3Q86XE3 530 aa20.34■□□□□ 0.85
TUBB3-211ENST00000556536 CCDC144CPQ8IYA2 1237 aa20.34■□□□□ 0.85
TUBB3-211ENST00000556536 PROCA1Q8NCQ7 364 aaPredicted RBP20.34■□□□□ 0.85
TUBB3-211ENST00000556536 DCAF4Q8WV16 495 aa20.34■□□□□ 0.85
TUBB3-211ENST00000556536 PTPN18Q99952 460 aa20.34■□□□□ 0.85
TUBB3-211ENST00000556536 RPAP3Q9H6T3 665 aaPredicted RBP20.34■□□□□ 0.85
TUBB3-211ENST00000556536 HPS5Q9UPZ3 1129 aa20.34■□□□□ 0.85
TUBB3-211ENST00000556536 FRMPD2Q68DX3 1309 aaPredicted RBP20.33■□□□□ 0.85
TUBB3-211ENST00000556536 MANSC4A6NHS7 340 aaPredicted RBP20.33■□□□□ 0.85
TUBB3-211ENST00000556536 GOLGA8BA8MQT2 603 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 ZBTB43O43298 467 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 GOLGA8HP0CJ92 632 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 BMP3P12645 472 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 PDIA3P30101 505 aaKnown RBP20.33■□□□□ 0.85
TUBB3-211ENST00000556536 SLC1A4P43007 532 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 GRM4Q14833 912 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 CCDC96Q2M329 555 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 SYNE3Q6ZMZ3 975 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 KCTD1Q719H9 257 aa20.33■□□□□ 0.85
TUBB3-211ENST00000556536 BTBD19C9JJ37 291 aa20.32■□□□□ 0.84
TUBB3-211ENST00000556536 WDR46O15213 610 aaKnown RBP20.32■□□□□ 0.84
TUBB3-211ENST00000556536 LARGE1O95461 756 aa20.32■□□□□ 0.84
TUBB3-211ENST00000556536 ZNF543Q08ER8 600 aa20.32■□□□□ 0.84
TUBB3-211ENST00000556536 STAG2Q8N3U4 1231 aa20.32■□□□□ 0.84
TUBB3-211ENST00000556536 ZNF274Q96GC6 653 aaPredicted RBP20.32■□□□□ 0.84
TUBB3-211ENST00000556536 GPCPD1Q9NPB8 672 aa20.32■□□□□ 0.84
TUBB3-211ENST00000556536 SAGE1Q9NXZ1 904 aa20.32■□□□□ 0.84
TUBB3-211ENST00000556536 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
TUBB3-211ENST00000556536 AGTPBP1Q9UPW5 1226 aa20.32■□□□□ 0.84
TUBB3-211ENST00000556536 GOLGA8AA7E2F4 631 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 CALM1P0DP23 149 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 CALM2P0DP24 149 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 CALM3P0DP25 149 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 STK3Q13188 491 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 TTBK2Q6IQ55 1244 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 FAM43AQ8N2R8 423 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 FANCBQ8NB91 859 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 FAM217BQ9NTX9 383 aaPredicted RBP20.31■□□□□ 0.84
TUBB3-211ENST00000556536 ISY1Q9ULR0 285 aaKnown RBP20.31■□□□□ 0.84
TUBB3-211ENST00000556536 LIMCH1Q9UPQ0 1083 aa20.31■□□□□ 0.84
TUBB3-211ENST00000556536 PALM3A6NDB9 673 aaPredicted RBP20.3■□□□□ 0.84
TUBB3-211ENST00000556536 TMEM232C9JQI7 657 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 IGF2BP3O00425 579 aaKnown RBP eCLIP20.3■□□□□ 0.84
TUBB3-211ENST00000556536 PARP1P09874 1014 aaKnown RBP20.3■□□□□ 0.84
TUBB3-211ENST00000556536 METAP2P50579 478 aaKnown RBP eCLIP20.3■□□□□ 0.84
TUBB3-211ENST00000556536 ME3Q16798 604 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 CATSPERGQ6ZRH7 1159 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 ANKRD23Q86SG2 305 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 IL27Q8NEV9 243 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 MAP3K14Q99558 947 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 TANGO6Q9C0B7 1094 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 FBXO28Q9NVF7 368 aa20.3■□□□□ 0.84
TUBB3-211ENST00000556536 MYH4Q9Y623 1939 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L15C9J2P7 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L13C9JLJ4 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L11C9JVI0 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L18D6R9N7 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L22D6RA61 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L17D6RBQ6 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L19D6RCP7 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L20D6RJB6 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 CDC27P30260 824 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
TUBB3-211ENST00000556536 SLC16A2P36021 539 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 RCAN1P53805 252 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 CCT2P78371 535 aaKnown RBP20.29■□□□□ 0.84
TUBB3-211ENST00000556536 USP17L24Q0WX57 530 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 SREBF2Q12772 1141 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 RTN1Q16799 776 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 ASPRV1Q53RT3 343 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 CTCFLQ8NI51 663 aaPredicted RBP20.29■□□□□ 0.84
TUBB3-211ENST00000556536 UBA5Q9GZZ9 404 aa20.29■□□□□ 0.84
TUBB3-211ENST00000556536 NCOA5Q9HCD5 579 aaKnown RBP20.29■□□□□ 0.84
TUBB3-211ENST00000556536 PDHXO00330 501 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 PFKFB2O60825 505 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 PLEKHA8P1O95397 391 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms