RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 FOXP1Q9H334 677 aaPredicted RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 LY9Q9HBG7 655 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 SENP2Q9HC62 589 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 SERTAD1Q9UHV2 236 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 HOOK1Q9UJC3 728 aaKnown RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 REXO2Q9Y3B8 237 aaKnown RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 ADAMTSL3P82987 1691 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 DISP2A7MBM2 1401 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 ARAP2Q8WZ64 1704 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 CPLX1O14810 134 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 MMP1P03956 469 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 EZRP15311 586 aaKnown RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 LIFRP42702 1097 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 FXR1P51114 621 aaKnown RBP eCLIP9.62□□□□□ -0.87
MARK3-210ENST00000556463 SLC39A6Q13433 755 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 MAP9Q49MG5 647 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 ZNF569Q5MCW4 686 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 MFSD4BQ5TF39 518 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 PAPD7Q5XG87 772 aaKnown RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 TBC1D10CQ8IV04 446 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 IGSF22Q8N9C0 903 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 SPDL1Q96EA4 605 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 CRACR2AQ9BSW2 395 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 LIMA1Q9UHB6 759 aaKnown RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 WWC3Q9ULE0 1092 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 BCORQ6W2J9 1755 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 ATXN2Q99700 1313 aaKnown RBP9.61□□□□□ -0.87
MARK3-210ENST00000556463 RNF225M0QZC1 329 aaPredicted RBP9.61□□□□□ -0.87
MARK3-210ENST00000556463 GCP02774 474 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 CDC25CP30307 473 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 CEP85LQ5SZL2 805 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 ARMCX6Q7L4S7 300 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 TMTC1Q8IUR5 882 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 CNGA4Q8IV77 575 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 TRMT44Q8IYL2 757 aaKnown RBP9.61□□□□□ -0.87
MARK3-210ENST00000556463 YIPF3Q9GZM5 350 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 STRN4Q9NRL3 753 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 CTAGE15A4D2H0 777 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 CTAGE8P0CG41 777 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 PHKG2P15735 406 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 METAP2P50579 478 aaKnown RBP eCLIP9.61□□□□□ -0.87
MARK3-210ENST00000556463 AMHR2Q16671 573 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 ZNF572Q7Z3I7 529 aaPredicted RBP9.61□□□□□ -0.87
MARK3-210ENST00000556463 CTAGE6Q86UF2 777 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 CTAGE4Q8IX94 777 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 RPUSD2Q8IZ73 545 aaKnown RBP9.61□□□□□ -0.87
MARK3-210ENST00000556463 CPLX3Q8WVH0 158 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 MIEF2Q96C03 454 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 TMEM87BQ96K49 555 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 CTAGE1Q96RT6 745 aa9.61□□□□□ -0.87
MARK3-210ENST00000556463 MYH13Q9UKX3 1938 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 CCDC189A1A4V9 331 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 RNF40O75150 1001 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 CASP14P31944 242 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 HAND2P61296 217 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 DPYDQ12882 1025 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 RBBP5Q15291 538 aaKnown RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 NFXL1Q6ZNB6 911 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 NBPF5PQ86XG9 351 aaPredicted RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 IQCA1Q86XH1 822 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 RIN2Q8WYP3 895 aaPredicted RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 CABS1Q96KC9 395 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 CDC5LQ99459 802 aaKnown RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 REPIN1Q9BWE0 567 aaKnown RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 ABHD10Q9NUJ1 306 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 MYO6Q9UM54 1294 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 MEGF6O75095 1541 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 A0A087X0B3 334 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 ZNF213O14771 459 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 POLR2DO15514 142 aaKnown RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 IFNAR1P17181 557 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 SCARF1Q14162 830 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 ALX1Q15699 326 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 COG1Q8WTW3 980 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 KAT2BQ92831 832 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 TMEM165Q9HC07 324 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 AATFQ9NY61 560 aaKnown RBP eCLIP9.6□□□□□ -0.87
MARK3-210ENST00000556463 UBE2Q2LH0YL09 131 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 NDUFAB1O14561 156 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 IPO7O95373 1038 aaKnown RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 SF3B2Q13435 895 aaKnown RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 RILPL1Q5EBL4 403 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 ARL10Q8N8L6 244 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 PHKBQ93100 1093 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 CCDC114Q96M63 670 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 RUFY1Q96T51 708 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 SH3GL2Q99962 352 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 ESF1Q9H501 851 aaKnown RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 IQSEC3Q9UPP2 1182 aaPredicted RBP9.6□□□□□ -0.87
MARK3-210ENST00000556463 TACC3Q9Y6A5 838 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 RIC1Q4ADV7 1423 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 KCPQ6ZWJ8 1503 aa9.6□□□□□ -0.87
MARK3-210ENST00000556463 GPAA1O43292 621 aa9.59□□□□□ -0.87
MARK3-210ENST00000556463 CCNHP51946 323 aaPredicted RBP9.59□□□□□ -0.87
MARK3-210ENST00000556463 ZNF827Q17R98 1081 aa9.59□□□□□ -0.87
MARK3-210ENST00000556463 XAGE2Q96GT9 111 aa9.59□□□□□ -0.87
MARK3-210ENST00000556463 NEUROD6Q96NK8 337 aa9.59□□□□□ -0.87
MARK3-210ENST00000556463 GRIN2DO15399 1336 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms