RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 CALM1P0DP23 149 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 CALM2P0DP24 149 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 CALM3P0DP25 149 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 RCAN1P53805 252 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 PPATQ06203 517 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 ZNF280CQ8ND82 737 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 PNMA1Q8ND90 353 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 ELP3Q9H9T3 547 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 SENP2Q9HC62 589 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 TMX2Q9Y320 296 aa11.75□□□□□ -0.53
MTHFD1-213ENST00000556284 PAPPA2Q9BXP8 1791 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 KLF18A0A0U1RQI7 1052 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 A0A1W2PRG0 241 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 SPDYE5A6NIY4 337 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 C19orf81C9J6K1 198 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 ZBTB43O43298 467 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 DDAH1O94760 285 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 USP14P54578 494 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 PPP2R5BQ15173 497 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 APOA5Q6Q788 366 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 CLEC10AQ8IUN9 316 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 ZNF654Q8IZM8 581 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 CHMP4CQ96CF2 233 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 KIAA1683Q9H0B3 1180 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 SH2B1Q9NRF2 756 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 AFG3L2Q9Y4W6 797 aa11.74□□□□□ -0.53
MTHFD1-213ENST00000556284 USP17L10C9JJH3 530 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 CXCL11O14625 94 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 CD2BP2O95400 341 aaKnown RBP11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 PDIA3P30101 505 aaKnown RBP11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 ECE1P42892 770 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 BACE1P56817 501 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 HUNKP57058 714 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 TROAPQ12815 778 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 SPP2Q13103 211 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 PPIL2Q13356 520 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 HSCBQ8IWL3 235 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 HHIPL1Q96JK4 782 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 FEZ1Q99689 392 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 GREB1LQ9C091 1923 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 VCPKMTQ9H867 229 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 TPCN1Q9ULQ1 816 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 TLL2Q9Y6L7 1015 aa11.73□□□□□ -0.53
MTHFD1-213ENST00000556284 MYH8P13535 1937 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 TRIM75PA6NK02 468 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 GOLGA8BA8MQT2 603 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 F5H6K3 240 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 PFKFB2O60825 505 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 SNHG28P0DPA3 235 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 KIF5BP33176 963 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 KLRC3Q07444 240 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 BECN1Q14457 450 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 SLFN13Q68D06 897 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 CCDC84Q86UT8 332 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 FANCBQ8NB91 859 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 NUP133Q8WUM0 1156 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 LPAR1Q92633 364 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 OPTNQ96CV9 577 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 GMCL1Q96IK5 515 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 SLKQ9H2G2 1235 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 NAP1L2Q9ULW6 460 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 KCNH4Q9UQ05 1017 aa11.72□□□□□ -0.53
MTHFD1-213ENST00000556284 TESPA1A2RU30 521 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 K7ELQ4 463 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 IRF6O14896 467 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 SNPHO15079 494 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 DHX16O60231 1041 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 NDUFB10O96000 172 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 PDHBP11177 359 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 GNAQP50148 359 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 APLP1P51693 650 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 MTMR2Q13614 643 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 GRM4Q14833 912 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 ME3Q16798 604 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 SH3D19Q5HYK7 790 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 RGMBQ6NW40 437 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 NOL8Q76FK4 1167 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 MICU3Q86XE3 530 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 CTCFLQ8NI51 663 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 TMX3Q96JJ7 454 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 C12orf42Q96LP6 360 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms