RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 WAPLQ7Z5K2 1190 aa6.75□□□□□ -1.33
SCFD1-218ENST00000556256 ENOX1Q8TC92 643 aaKnown RBP6.75□□□□□ -1.33
SCFD1-218ENST00000556256 VWCEQ96DN2 955 aa6.75□□□□□ -1.33
SCFD1-218ENST00000556256 MAP6Q96JE9 813 aa6.75□□□□□ -1.33
SCFD1-218ENST00000556256 CCDC74BQ96LY2 380 aa6.75□□□□□ -1.33
SCFD1-218ENST00000556256 ARID3AQ99856 593 aa6.75□□□□□ -1.33
SCFD1-218ENST00000556256 RNF19AQ9NV58 838 aa6.75□□□□□ -1.33
SCFD1-218ENST00000556256 PNLIPP16233 465 aa6.74□□□□□ -1.33
SCFD1-218ENST00000556256 KIR2DL1P43626 348 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-218ENST00000556256 KIR2DL2P43627 348 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-218ENST00000556256 CDR1P51861 262 aa6.74□□□□□ -1.33
SCFD1-218ENST00000556256 MEI1Q5TIA1 1274 aa6.74□□□□□ -1.33
SCFD1-218ENST00000556256 CNKSR3Q6P9H4 555 aa6.74□□□□□ -1.33
SCFD1-218ENST00000556256 CEP128Q6ZU80 1094 aa6.74□□□□□ -1.33
SCFD1-218ENST00000556256 CCDC84Q86UT8 332 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-218ENST00000556256 PHC3Q8NDX5 983 aa6.74□□□□□ -1.33
SCFD1-218ENST00000556256 MZB1Q8WU39 189 aa6.74□□□□□ -1.33
SCFD1-218ENST00000556256 TMEM82A0PJX8 343 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 FAM221AA4D161 298 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 CILPO75339 1184 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 RLBP1P12271 317 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 NMIQ13287 307 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-218ENST00000556256 BNC2Q6ZN30 1099 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-218ENST00000556256 FAM129CQ86XR2 697 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 SYTL5Q8TDW5 730 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-218ENST00000556256 HHIPL1Q96JK4 782 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 FOXP3Q9BZS1 431 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 ASCC2Q9H1I8 757 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-218ENST00000556256 ADAM7Q9H2U9 754 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 REV1Q9UBZ9 1251 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 PRR36Q9H6K5 1346 aa6.73□□□□□ -1.33
SCFD1-218ENST00000556256 SP8Q8IXZ3 490 aa6.72□□□□□ -1.33
SCFD1-218ENST00000556256 DAGLBQ8NCG7 672 aa6.72□□□□□ -1.33
SCFD1-218ENST00000556256 TCTN2Q96GX1 697 aa6.72□□□□□ -1.33
SCFD1-218ENST00000556256 TEPSINQ96N21 525 aa6.72□□□□□ -1.33
SCFD1-218ENST00000556256 KIF2CQ99661 725 aa6.72□□□□□ -1.33
SCFD1-218ENST00000556256 PLCD4Q9BRC7 762 aa6.72□□□□□ -1.33
SCFD1-218ENST00000556256 HDAC8Q9BY41 377 aa6.72□□□□□ -1.33
SCFD1-218ENST00000556256 LUC7LQ9NQ29 371 aaKnown RBP6.72□□□□□ -1.33
SCFD1-218ENST00000556256 KLHL3Q9UH77 587 aa6.72□□□□□ -1.33
SCFD1-218ENST00000556256 ABLIM1O14639 778 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 PRPF40AO75400 957 aaKnown RBP6.71□□□□□ -1.34
SCFD1-218ENST00000556256 BPNT1O95861 308 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 RTP1P59025 263 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 ERVFRD-1P60508 538 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 OLFML2BQ68BL8 750 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 DIEXFQ68CQ4 756 aaKnown RBP6.71□□□□□ -1.34
SCFD1-218ENST00000556256 IGDCC3Q8IVU1 814 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 LINC01356Q8N9X3 169 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 BORCS6Q96GS4 357 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 TMPRSS5Q9H3S3 457 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 TCFL5Q9UL49 500 aa6.71□□□□□ -1.34
SCFD1-218ENST00000556256 ZC3H12DA2A288 527 aaKnown RBP6.7□□□□□ -1.34
SCFD1-218ENST00000556256 DNAJA2O60884 412 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 F13A1P00488 732 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 PCBP3P57721 371 aaKnown RBP6.7□□□□□ -1.34
SCFD1-218ENST00000556256 KIR3DS1Q14943 382 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 ZXDCQ2QGD7 858 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-218ENST00000556256 ZPBP2Q6X784 338 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 FRMD5Q7Z6J6 570 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 LDHDQ86WU2 507 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 PHACTR4Q8IZ21 702 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 ZNF655Q8N720 491 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-218ENST00000556256 TP53I13Q8NBR0 393 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-218ENST00000556256 LINC00116Q8NCU8 138 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 GATAD2BQ8WXI9 593 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 PWWP2AQ96N64 755 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 NOC4LQ9BVI4 516 aaKnown RBP6.7□□□□□ -1.34
SCFD1-218ENST00000556256 KLHL14Q9P2G3 628 aa6.7□□□□□ -1.34
SCFD1-218ENST00000556256 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
SCFD1-218ENST00000556256 GRIN3BO60391 1043 aa6.69□□□□□ -1.34
SCFD1-218ENST00000556256 HTR3BO95264 441 aa6.69□□□□□ -1.34
SCFD1-218ENST00000556256 MPOP05164 745 aa6.69□□□□□ -1.34
SCFD1-218ENST00000556256 EFEMP1Q12805 493 aa6.69□□□□□ -1.34
SCFD1-218ENST00000556256 CAMK2GQ13555 558 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-218ENST00000556256 DUSP9Q99956 384 aaKnown RBP6.69□□□□□ -1.34
SCFD1-218ENST00000556256 POLR3KQ9Y2Y1 108 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-218ENST00000556256 F6X3S4 739 aa6.68□□□□□ -1.34
SCFD1-218ENST00000556256 FKTNO75072 461 aa6.68□□□□□ -1.34
SCFD1-218ENST00000556256 GBP1P32455 592 aa6.68□□□□□ -1.34
SCFD1-218ENST00000556256 LMNB2Q03252 620 aa6.68□□□□□ -1.34
SCFD1-218ENST00000556256 PLP2Q04941 152 aa6.68□□□□□ -1.34
SCFD1-218ENST00000556256 TAF1CQ15572 869 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-218ENST00000556256 SPATS1Q496A3 300 aa6.68□□□□□ -1.34
SCFD1-218ENST00000556256 TMC3Q7Z5M5 1100 aa6.68□□□□□ -1.34
SCFD1-218ENST00000556256 PCDHA5Q9Y5H7 936 aa6.68□□□□□ -1.34
SCFD1-218ENST00000556256 FADS2P1A8MWK0 482 aa6.67□□□□□ -1.34
SCFD1-218ENST00000556256 RGS13O14921 159 aa6.67□□□□□ -1.34
SCFD1-218ENST00000556256 PF4P02776 101 aa6.67□□□□□ -1.34
SCFD1-218ENST00000556256 SYPP08247 313 aa6.67□□□□□ -1.34
SCFD1-218ENST00000556256 BBS9Q3SYG4 887 aa6.67□□□□□ -1.34
SCFD1-218ENST00000556256 C14orf37Q86TY3 774 aa6.67□□□□□ -1.34
SCFD1-218ENST00000556256 PRICKLE3O43900 615 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-218ENST00000556256 UBOX5O94941 541 aa6.66□□□□□ -1.34
SCFD1-218ENST00000556256 NCKAP1LP55160 1127 aa6.66□□□□□ -1.34
SCFD1-218ENST00000556256 CHMP4BP1P59074 171 aa6.66□□□□□ -1.34
SCFD1-218ENST00000556256 NBPF9Q3BBW0 867 aa6.66□□□□□ -1.34
SCFD1-218ENST00000556256 GALNT18Q6P9A2 607 aa6.66□□□□□ -1.34
SCFD1-218ENST00000556256 TMC6Q7Z403 805 aa6.66□□□□□ -1.34
SCFD1-218ENST00000556256 BDH2Q9BUT1 245 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms