RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 HOOK2Q96ED9 719 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 GUCD1Q96NT3 240 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 PARK7Q99497 189 aaKnown RBP8.74□□□□□ -1.01
ATXN3-236ENST00000556220 GAS2L1Q99501 681 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-236ENST00000556220 ESYT1Q9BSJ8 1104 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 CHMP4AQ9BY43 222 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 UBE2OQ9C0C9 1292 aaKnown RBP8.74□□□□□ -1.01
ATXN3-236ENST00000556220 PRUNE2Q8WUY3 3088 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 LAMA2P24043 3122 aaKnown RBP8.73□□□□□ -1.01
ATXN3-236ENST00000556220 SYN1P17600 705 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 CASP7P55210 303 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 MARSP56192 900 aaKnown RBP8.73□□□□□ -1.01
ATXN3-236ENST00000556220 MAP3K10Q02779 954 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 FKBP1CQ5VVH2 108 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 DCAF15Q66K64 600 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 FAM83AQ86UY5 434 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 CCDC146Q8IYE0 955 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 TDRD7Q8NHU6 1098 aaKnown RBP8.73□□□□□ -1.01
ATXN3-236ENST00000556220 ZNF341Q9BYN7 854 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 ZSWIM8A7E2V4 1837 aa8.73□□□□□ -1.01
ATXN3-236ENST00000556220 CXCL11O14625 94 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 F11P03951 625 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 CELA2BP08218 269 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-236ENST00000556220 CYP2C8P10632 490 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 INPP5BP32019 993 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 CACNB3P54284 484 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 HDLBPQ00341 1268 aaKnown RBP8.72□□□□□ -1.01
ATXN3-236ENST00000556220 CENPCQ03188 943 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 IFIT5Q13325 482 aaKnown RBP8.72□□□□□ -1.01
ATXN3-236ENST00000556220 GCKRQ14397 625 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 GPAT2Q6NUI2 795 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 MIGA2Q7L4E1 593 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 RUNDC1Q96C34 613 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 SCARF2Q96GP6 870 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-236ENST00000556220 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 MRIQ9BWK5 157 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 TIMMDC1Q9NPL8 285 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 ENAMQ9NRM1 1142 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 ZNF112Q9UJU3 913 aa8.72□□□□□ -1.01
ATXN3-236ENST00000556220 EYSQ5T1H1 3165 aa8.71□□□□□ -1.01
ATXN3-236ENST00000556220 PLIN1O60240 522 aa8.71□□□□□ -1.02
ATXN3-236ENST00000556220 HIBADHP31937 336 aaKnown RBP8.71□□□□□ -1.02
ATXN3-236ENST00000556220 USP4Q13107 963 aa8.71□□□□□ -1.02
ATXN3-236ENST00000556220 GRIK5Q16478 980 aa8.71□□□□□ -1.02
ATXN3-236ENST00000556220 KCTD17Q8N5Z5 321 aa8.71□□□□□ -1.02
ATXN3-236ENST00000556220 C8orf58Q8NAV2 365 aa8.71□□□□□ -1.02
ATXN3-236ENST00000556220 GTPBP3Q969Y2 492 aaKnown RBP8.71□□□□□ -1.02
ATXN3-236ENST00000556220 FAM84BQ96KN1 310 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-236ENST00000556220 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.71□□□□□ -1.021e-11■■■■□ 25.2
ATXN3-236ENST00000556220 C11orf49Q9H6J7 331 aa8.71□□□□□ -1.02
ATXN3-236ENST00000556220 IFT57Q9NWB7 429 aa8.71□□□□□ -1.02
ATXN3-236ENST00000556220 HRH3Q9Y5N1 445 aa8.71□□□□□ -1.02
ATXN3-236ENST00000556220 OTOFQ9HC10 1997 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 TNPO2O14787 897 aaKnown RBP8.7□□□□□ -1.02
ATXN3-236ENST00000556220 IL2RAP01589 272 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 GYG1P46976 350 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 UBE4AQ14139 1066 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 NOL9Q5SY16 702 aaKnown RBP8.7□□□□□ -1.02
ATXN3-236ENST00000556220 APOBEC3HQ6NTF7 200 aaKnown RBP8.7□□□□□ -1.02
ATXN3-236ENST00000556220 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 FASTKD5Q7L8L6 764 aaKnown RBP8.7□□□□□ -1.02
ATXN3-236ENST00000556220 PHTF2Q8N3S3 785 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 XAGE2Q96GT9 111 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 ZDHHC15Q96MV8 337 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 FAM161BQ96MY7 647 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 RAB6BQ9NRW1 208 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 TMOD2Q9NZR1 351 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 CDH23Q9H251 3354 aa8.7□□□□□ -1.02
ATXN3-236ENST00000556220 GNAI1P63096 354 aa8.69□□□□□ -1.02
ATXN3-236ENST00000556220 LDHAL6AQ6ZMR3 332 aa8.69□□□□□ -1.02
ATXN3-236ENST00000556220 TBC1D22AQ8WUA7 517 aa8.69□□□□□ -1.02
ATXN3-236ENST00000556220 TEKT1Q969V4 418 aa8.69□□□□□ -1.02
ATXN3-236ENST00000556220 COA7Q96BR5 231 aa8.69□□□□□ -1.02
ATXN3-236ENST00000556220 ZSCAN10Q96SZ4 725 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-236ENST00000556220 OGDHLQ9ULD0 1010 aa8.69□□□□□ -1.02
ATXN3-236ENST00000556220 SLC45A1Q9Y2W3 748 aa8.69□□□□□ -1.02
ATXN3-236ENST00000556220 ECM29Q5VYK3 1845 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 A0A0G2JLL6 359 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-236ENST00000556220 IRS1P35568 1242 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 FOXO4P98177 505 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 SLFNL1Q499Z3 407 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 G2E3Q7L622 706 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 PRRT2Q7Z6L0 340 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-236ENST00000556220 FBXO33Q7Z6M2 555 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 TSPYL6Q8N831 410 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 MAFAQ8NHW3 353 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-236ENST00000556220 FAM151AQ8WW52 585 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 CDX2Q99626 313 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-236ENST00000556220 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
ATXN3-236ENST00000556220 MYH16Q9H6N6 1097 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 CNNM1Q9NRU3 951 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 DOLKQ9UPQ8 538 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 CHMP3Q9Y3E7 222 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 NCOR1O75376 2440 aa8.68□□□□□ -1.02
ATXN3-236ENST00000556220 A0A1B0GTH6 734 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 HMGCRP04035 888 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 CALD1Q05682 793 aaKnown RBP8.67□□□□□ -1.02
ATXN3-236ENST00000556220 CHAF1AQ13111 956 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-236ENST00000556220 RALBP1Q15311 655 aa8.67□□□□□ -1.02
ATXN3-236ENST00000556220 CCDC57Q2TAC2 916 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms