RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 H7C1D1 291 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 RNF113AO15541 343 aaKnown RBP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 TFRCP02786 760 aaKnown RBP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 ZFYP08048 801 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 SKIP12755 728 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 PSMA5P28066 241 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 ARID4AP29374 1257 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 KCNQ1P51787 676 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 KIAA2012Q0VF49 1180 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 PRKG1Q13976 671 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 TTF1Q15361 905 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 NFKBIBQ15653 356 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 TBC1D10BQ4KMP7 808 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 MORN1Q5T089 497 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 PHLDB3Q6NSJ2 640 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 ZSCAN25Q6NSZ9 544 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 MOB2Q70IA6 237 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 ZNF592Q92610 1267 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 DPF2Q92785 391 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 MAP4K1Q92918 833 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 KCNB2Q92953 911 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 EDC3Q96F86 508 aaKnown RBP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 TM6SF1Q9BZW5 370 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 IL25Q9H293 177 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 PALD1Q9ULE6 856 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 SNX14Q9Y5W7 946 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 PTPN13Q12923 2485 aa8.09□□□□□ -1.11
SLIRP-204ENST00000555890 ATRNL1Q5VV63 1379 aa8.09□□□□□ -1.12
SLIRP-204ENST00000555890 MED23Q9ULK4 1368 aa8.09□□□□□ -1.12
SLIRP-204ENST00000555890 A0A0D9SFI3 127 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 CD2BP2O95400 341 aaKnown RBP8.08□□□□□ -1.12
SLIRP-204ENST00000555890 ALADP13716 330 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 ADORA1P30542 326 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 PRMT2P55345 433 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 PTH1RQ03431 593 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 CRHR2Q13324 411 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 KRT32Q14532 448 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 TNIP1Q15025 636 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 NECTIN1Q15223 517 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 CCDC85BQ15834 202 aaPredicted RBP8.08□□□□□ -1.12
SLIRP-204ENST00000555890 LAPTM4BQ86VI4 370 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 ANKRD18AQ8IVF6 992 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 VGLL2Q8N8G2 317 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 ZKSCAN4Q969J2 545 aaPredicted RBP8.08□□□□□ -1.12
SLIRP-204ENST00000555890 CDCA5Q96FF9 252 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 MFSD14AQ96MC6 490 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 PRRX2Q99811 253 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 CWC22Q9HCG8 908 aaKnown RBP8.08□□□□□ -1.12
SLIRP-204ENST00000555890 SEC31BQ9NQW1 1179 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 KCNQ5Q9NR82 932 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 HMG20BQ9P0W2 317 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 ATP6V0A2Q9Y487 856 aa8.08□□□□□ -1.12
SLIRP-204ENST00000555890 RBM8AQ9Y5S9 174 aaKnown RBP8.08□□□□□ -1.12
SLIRP-204ENST00000555890 MANSC4A6NHS7 340 aaPredicted RBP8.07□□□□□ -1.12
SLIRP-204ENST00000555890 UBE2Q2LH0YL09 131 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 TAF5LO75529 589 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 FGFR2P21802 821 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 PSEN2P49810 448 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 ZMYM1Q5SVZ6 1142 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 CREB3L3Q68CJ9 461 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 PRSS33Q8NF86 280 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 SLC27A5Q9Y2P5 690 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 CYP46A1Q9Y6A2 500 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 ANKRD17O75179 2603 aaKnown RBP8.07□□□□□ -1.12
SLIRP-204ENST00000555890 XIRP2A4UGR9 3374 aa8.07□□□□□ -1.12
SLIRP-204ENST00000555890 DUOX1Q9NRD9 1551 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L15C9J2P7 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L10C9JJH3 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L13C9JLJ4 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L12C9JPN9 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L11C9JVI0 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L21D6R901 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L18D6R9N7 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L22D6RA61 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L17D6RBQ6 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L19D6RCP7 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L20D6RJB6 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 PSMD14O00487 310 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 SLC27A2O14975 620 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 RNF40O75150 1001 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 CASTP20810 708 aaKnown RBP8.06□□□□□ -1.12
SLIRP-204ENST00000555890 DDIT3P35638 169 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 ZAP70P43403 619 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 UBXN2AP68543 259 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 NUCB2P80303 420 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 TFF2Q03403 129 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 CHRNDQ07001 517 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 USP17L24Q0WX57 530 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 VPS53Q5VIR6 699 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 CCDC102BQ68D86 513 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 OTUD7BQ6GQQ9 843 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 INTS4Q96HW7 963 aaKnown RBP8.06□□□□□ -1.12
SLIRP-204ENST00000555890 RBM17Q96I25 401 aaKnown RBP8.06□□□□□ -1.12
SLIRP-204ENST00000555890 TMX3Q96JJ7 454 aa8.06□□□□□ -1.12
SLIRP-204ENST00000555890 ZSCAN31Q96LW9 406 aaPredicted RBP8.06□□□□□ -1.12
SLIRP-204ENST00000555890 JAKMIP1Q96N16 626 aaKnown RBP8.06□□□□□ -1.12
SLIRP-204ENST00000555890 LBHD1Q9BQE6 289 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms