RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 SAFBQ15424 915 aaKnown RBP eCLIP12.87□□□□□ -0.35
XRCC3-213ENST00000555451 PKN1Q16512 942 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 PFKFB3Q16875 520 aaPredicted RBP12.87□□□□□ -0.35
XRCC3-213ENST00000555451 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
XRCC3-213ENST00000555451 CST9Q5W186 159 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 KRT26Q7Z3Y9 468 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
XRCC3-213ENST00000555451 TMEM87AQ8NBN3 555 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 AIFM3Q96NN9 605 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 MTMR7Q9Y216 660 aa12.87□□□□□ -0.35
XRCC3-213ENST00000555451 V9GY48 417 aaPredicted RBP12.87□□□□□ -0.35
XRCC3-213ENST00000555451 TCHHQ07283 1943 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 USP17L5A8MUK1 530 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 MMP1P03956 469 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 ASNSP08243 561 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 SCG2P13521 617 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 KIF23Q02241 960 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-213ENST00000555451 DNM1Q05193 864 aaKnown RBP12.86□□□□□ -0.35
XRCC3-213ENST00000555451 ZNF543Q08ER8 600 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 OTUD7BQ6GQQ9 843 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 MIGA2Q7L4E1 593 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 ZNF396Q96N95 335 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-213ENST00000555451 ANP32EQ9BTT0 268 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 ZNF341Q9BYN7 854 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 SH2D4AQ9H788 454 aa12.86□□□□□ -0.35
XRCC3-213ENST00000555451 DOCK1Q14185 1865 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 PHF20L1A8MW92 1017 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 UBE2Q2LH0YL09 131 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 hCG_1984214I3L0E3 225 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 GOLGA8HP0CJ92 632 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 NCLP19338 710 aaKnown RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 JAG1P78504 1218 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 GNL2Q13823 731 aaKnown RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 CCDC96Q2M329 555 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 SHROOM1Q2M3G4 852 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 SLFN13Q68D06 897 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 RRP36Q96EU6 259 aaKnown RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 GMCL1Q96IK5 515 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 SCAND2PQ9GZW5 306 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 RIOX1Q9H6W3 641 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 SH3GLB2Q9NR46 395 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 GJB4Q9NTQ9 266 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 LMBRD1Q9NUN5 540 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 CNPY2Q9Y2B0 182 aa12.85□□□□□ -0.35
XRCC3-213ENST00000555451 FRMPD2Q68DX3 1309 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-213ENST00000555451 ADM5C9JUS6 153 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 FIBPO43427 364 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 CYTH3O43739 400 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
XRCC3-213ENST00000555451 U2AF2P26368 475 aaKnown RBP eCLIP12.84□□□□□ -0.35
XRCC3-213ENST00000555451 SLC1A4P43007 532 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 SUPT20HL1Q3ZLR7 823 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 NBPF12Q5TAG4 269 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-213ENST00000555451 DLK2Q6UY11 383 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 RASGRP2Q7LDG7 609 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 KLRG1Q96E93 195 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 CHAMP1Q96JM3 812 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 PHF20Q9BVI0 1012 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 FOXP1Q9H334 677 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-213ENST00000555451 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 VPS54Q9P1Q0 977 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 SEC63Q9UGP8 760 aaKnown RBP12.84□□□□□ -0.35
XRCC3-213ENST00000555451 SCAF8Q9UPN6 1271 aaKnown RBP12.84□□□□□ -0.35
XRCC3-213ENST00000555451 TMX2Q9Y320 296 aa12.84□□□□□ -0.35
XRCC3-213ENST00000555451 POLR2AP24928 1970 aaKnown RBP12.83□□□□□ -0.35
XRCC3-213ENST00000555451 TRPM7Q96QT4 1865 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 hCG_1642624A0A1W2PR95 340 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 F5H6K3 240 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 TRAK2O60296 914 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
XRCC3-213ENST00000555451 CALML3P27482 149 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 KLRC3Q07444 240 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 FAM173BQ6P4H8 233 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 DIS3L2Q8IYB7 885 aaKnown RBP12.83□□□□□ -0.36
XRCC3-213ENST00000555451 CCDC12Q8WUD4 166 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-213ENST00000555451 GPCPD1Q9NPB8 672 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 ZNF112Q9UJU3 913 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 KCNJ14Q9UNX9 436 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 ELP1O95163 1332 aa12.83□□□□□ -0.36
XRCC3-213ENST00000555451 A0A1W2PRG0 241 aa12.82□□□□□ -0.36
XRCC3-213ENST00000555451 RASSF10A6NK89 507 aa12.82□□□□□ -0.36
XRCC3-213ENST00000555451 MBD3O95983 291 aa12.82□□□□□ -0.36
XRCC3-213ENST00000555451 NDUFB10O96000 172 aa12.82□□□□□ -0.36
XRCC3-213ENST00000555451 BMP3P12645 472 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms