RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 PIK3R2O00459 728 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 SHOXO15266 292 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 TBX1O43435 398 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 KCNQ2O43526 872 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 PDE8AO60658 829 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 PPM1BO75688 479 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 CAPNS1P04632 268 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 PDGFRBP09619 1106 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 FGFR1P11362 822 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 POU3F3P20264 500 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-211ENST00000554995 CD247P20963 164 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 GRIA2P42262 883 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 LINC00114Q6XXX2 140 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 PRPF38AQ8NAV1 312 aaKnown RBP7.55□□□□□ -1.2
PSEN1-211ENST00000554995 BVESQ8NE79 360 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 VWCEQ96DN2 955 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 KREMEN1Q96MU8 473 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 MRPL4Q9BYD3 311 aaKnown RBP7.55□□□□□ -1.2
PSEN1-211ENST00000554995 CAAP1Q9H8G2 361 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 TYW1Q9NV66 732 aaKnown RBP7.55□□□□□ -1.2
PSEN1-211ENST00000554995 WHRNQ9P202 907 aa7.55□□□□□ -1.2
PSEN1-211ENST00000554995 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-211ENST00000554995 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 PRODHO43272 600 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 PABPC1P11940 636 aaKnown RBP7.54□□□□□ -1.2
PSEN1-211ENST00000554995 ELNP15502 786 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 RNF4P78317 190 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 TRIM28Q13263 835 aaKnown RBP7.54□□□□□ -1.2
PSEN1-211ENST00000554995 AUHQ13825 339 aaKnown RBP7.54□□□□□ -1.2
PSEN1-211ENST00000554995 NSMFQ6X4W1 530 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 NOL8Q76FK4 1167 aaKnown RBP7.54□□□□□ -1.2
PSEN1-211ENST00000554995 OSBP2Q969R2 916 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 MRGPRX3Q96LB0 322 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 MIPEPQ99797 713 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 ATP8A1Q9Y2Q0 1164 aa7.54□□□□□ -1.2
PSEN1-211ENST00000554995 F8W735 103 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-211ENST00000554995 NOP56O00567 594 aaKnown RBP7.53□□□□□ -1.2
PSEN1-211ENST00000554995 PARNO95453 639 aaKnown RBP7.53□□□□□ -1.2
PSEN1-211ENST00000554995 S100BP04271 92 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-211ENST00000554995 ITGA4P13612 1032 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 RAB6AP20340 208 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 SOX5P35711 763 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 PREPP48147 710 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 CDKN1CP49918 316 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-211ENST00000554995 EVA1CP58658 441 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
PSEN1-211ENST00000554995 SUMO1P63165 101 aaKnown RBP7.53□□□□□ -1.2
PSEN1-211ENST00000554995 CT47A1Q5JQC4 288 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-211ENST00000554995 LETMD1Q6P1Q0 360 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 RNF180Q86T96 592 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 TMEM130Q8N3G9 435 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 UBR7Q8N806 425 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 ADCY4Q8NFM4 1077 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 ACSS3Q9H6R3 686 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 GP6Q9HCN6 339 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 MKL2Q9ULH7 1088 aa7.53□□□□□ -1.2
PSEN1-211ENST00000554995 DNAJC25-GNG10A0A024R161 153 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 GSG1L2A8MUP6 293 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 FURINP09958 794 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 SDSP20132 328 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 SHISA2Q6UWI4 295 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 CDH24Q86UP0 819 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 FERMT3Q86UX7 667 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 DDX42Q86XP3 938 aaKnown RBP eCLIP7.52□□□□□ -1.21
PSEN1-211ENST00000554995 TRIM59Q8IWR1 403 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 RIN3Q8TB24 985 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 RCC1LQ96I51 464 aaKnown RBP7.52□□□□□ -1.21
PSEN1-211ENST00000554995 IER2Q9BTL4 223 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 HOMER2Q9NSB8 354 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 AKT3Q9Y243 479 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 EMC9Q9Y3B6 208 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.21
PSEN1-211ENST00000554995 GNB5O14775 395 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 SLITRK5O94991 958 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 ALX3O95076 343 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 NFKB2Q00653 900 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 LRRTM3Q86VH5 581 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 ARHGEF39Q8N4T4 335 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 RNF141Q8WVD5 230 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 BTN2A2Q8WVV5 523 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 TARS2Q9BW92 718 aaKnown RBP7.51□□□□□ -1.21
PSEN1-211ENST00000554995 ASPNQ9BXN1 380 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 INTS7Q9NVH2 962 aaKnown RBP7.51□□□□□ -1.21
PSEN1-211ENST00000554995 MAGEC2Q9UBF1 373 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-211ENST00000554995 CGGBP1Q9UFW8 167 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-211ENST00000554995 SFMBT1Q9UHJ3 866 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 FBXL21Q9UKT6 434 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 G3BP2Q9UN86 482 aaKnown RBP7.51□□□□□ -1.21
PSEN1-211ENST00000554995 MAPRE3Q9UPY8 281 aa7.51□□□□□ -1.21
PSEN1-211ENST00000554995 A0A087WZG4 1122 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 C6orf222P0C671 652 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-211ENST00000554995 USP11P51784 963 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 ZNF445P59923 1031 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 TRIM61Q5EBN2 209 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 PRRT3Q5FWE3 981 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 CDPF1Q6NVV7 123 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 CNNM4Q6P4Q7 775 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 POMZP3Q6PJE2 187 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 CRACR2BQ8N4Y2 399 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-211ENST00000554995 FBXL18Q96ME1 805 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms