RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 UBE2Q2LH0YL09 131 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 H7C1D1 291 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 CHL1O00533 1208 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 ZBTB7BO15156 539 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-231ENST00000554994 CAMTA2O94983 1202 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 CPB1P15086 417 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 IL6STP40189 918 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-231ENST00000554994 EPHA4P54764 986 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 FAM35AQ86V20 835 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 WWC1Q8IX03 1113 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 DCPSQ96C86 337 aaKnown RBP5.96□□□□□ -1.46
ATXN3-231ENST00000554994 SHISA4Q96DD7 197 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 GDPD2Q9HCC8 539 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 GGA3Q9NZ52 723 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 SCAF8Q9UPN6 1271 aaKnown RBP5.96□□□□□ -1.46
ATXN3-231ENST00000554994 RNF114Q9Y508 228 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 RPTORQ8N122 1335 aa5.96□□□□□ -1.46
ATXN3-231ENST00000554994 ANKRD36CQ5JPF3 1778 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 POLR2AP24928 1970 aaKnown RBP5.95□□□□□ -1.46
ATXN3-231ENST00000554994 A0A1W2PPC1 479 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 CCER2I3L3R5 266 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 NFKB1P19838 968 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 GPTP24298 496 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 ALDH1B1P30837 517 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 TM4SF4P48230 202 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 HLFQ16534 295 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 SLC9C1Q4G0N8 1177 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 HDGFL1Q5TGJ6 251 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 TTLL7Q6ZT98 887 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 COPS6Q7L5N1 327 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 FBXO11Q86XK2 927 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 C8orf58Q8NAV2 365 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 SH3TC2Q8TF17 1288 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 FAM161BQ96MY7 647 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 EFCC1Q9HA90 598 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 IFT57Q9NWB7 429 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 BABAM1Q9NWV8 329 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 NIP7Q9Y221 180 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-231ENST00000554994 ZNF652Q9Y2D9 606 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 NR2E3Q9Y5X4 410 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 PTCH2Q9Y6C5 1203 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 ARID1BQ8NFD5 2236 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-231ENST00000554994 CDHR2Q9BYE9 1310 aa5.95□□□□□ -1.46
ATXN3-231ENST00000554994 ABCC12Q96J65 1359 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 KLRG2A4D1S0 409 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-231ENST00000554994 PSMA6P60900 246 aaKnown RBP5.94□□□□□ -1.46
ATXN3-231ENST00000554994 EXOSC9Q06265 439 aaKnown RBP5.94□□□□□ -1.46
ATXN3-231ENST00000554994 SREBF2Q12772 1141 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 NCOA4Q13772 614 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 C1orf53Q5VUE5 145 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 PRAMEF18Q5VWM3 479 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 WFDC8Q8IUA0 241 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 WDR63Q8IWG1 891 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 DEPDC4Q8N2C3 294 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 XAGE3Q8WTP9 111 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 ERO1AQ96HE7 468 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 GUCD1Q96NT3 240 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 TSPAN10Q9H1Z9 355 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-231ENST00000554994 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-231ENST00000554994 OAS3Q9Y6K5 1087 aaKnown RBP5.94□□□□□ -1.46
ATXN3-231ENST00000554994 IRS2Q9Y4H2 1338 aa5.94□□□□□ -1.46
ATXN3-231ENST00000554994 MYH3P11055 1940 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 SPEF2Q9C093 1822 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 YDJCA8MPS7 323 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 ALX3O95076 343 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 HNRNPUQ00839 825 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATXN3-231ENST00000554994 FZD5Q13467 585 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 TNIP1Q15025 636 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 WASHC4Q2M389 1173 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 PROSER3Q2NL68 480 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 TWISTNBQ3B726 338 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-231ENST00000554994 CCDC30Q5VVM6 783 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 IGF2-ASQ6U949 168 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 TPTE2Q6XPS3 522 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 BTLAQ7Z6A9 289 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 TSPYL6Q8N831 410 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 MYH16Q9H6N6 1097 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 PHAXQ9H814 394 aaKnown RBP5.93□□□□□ -1.46
ATXN3-231ENST00000554994 HYPKQ9NX55 129 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 DBF4Q9UBU7 674 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-231ENST00000554994 LAMB2P55268 1798 aa5.93□□□□□ -1.46
ATXN3-231ENST00000554994 ZNF853P0CG23 659 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 CD97P48960 835 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 GP2P55259 537 aaKnown RBP5.92□□□□□ -1.46
ATXN3-231ENST00000554994 PLAURQ03405 335 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 PRKG1Q13976 671 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 CCDC27Q2M243 656 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 KIF4BQ2VIQ3 1234 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 DTWD1Q8N5C7 304 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 TPCN2Q8NHX9 752 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 JARID2Q92833 1246 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-231ENST00000554994 RPGRQ92834 1020 aaKnown RBP5.92□□□□□ -1.46
ATXN3-231ENST00000554994 HTATIP2Q9BUP3 242 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 CHMP4AQ9BY43 222 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 GSX2Q9BZM3 304 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 AKTIPQ9H8T0 292 aa5.92□□□□□ -1.46
ATXN3-231ENST00000554994 MAP3K15Q6ZN16 1313 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms