RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CYB5R4Q7L1T6 521 aa14.6□□□□□ -0.07
SYNE2-214ENST00000554928 HPS5Q9UPZ3 1129 aa14.6□□□□□ -0.07
SYNE2-214ENST00000554928 MTMR7Q9Y216 660 aa14.6□□□□□ -0.07
SYNE2-214ENST00000554928 PRKCZQ05513 592 aa14.59□□□□□ -0.07
SYNE2-214ENST00000554928 COG2Q14746 738 aa14.59□□□□□ -0.07
SYNE2-214ENST00000554928 KIF22Q14807 665 aa14.59□□□□□ -0.07
SYNE2-214ENST00000554928 TMEM47Q9BQJ4 181 aa14.59□□□□□ -0.07
SYNE2-214ENST00000554928 RNF41Q9H4P4 317 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-214ENST00000554928 ANO2Q9NQ90 1003 aa14.59□□□□□ -0.07
SYNE2-214ENST00000554928 TCP11L1Q9NUJ3 509 aa14.59□□□□□ -0.07
SYNE2-214ENST00000554928 ZSWIM5Q9P217 1185 aa14.59□□□□□ -0.07
SYNE2-214ENST00000554928 SRRDQ9UH36 339 aa14.59□□□□□ -0.07
SYNE2-214ENST00000554928 E7EWF7 191 aa14.58□□□□□ -0.08
SYNE2-214ENST00000554928 PCP11498 1178 aaKnown RBP14.58□□□□□ -0.08
SYNE2-214ENST00000554928 MCCP23508 829 aa14.58□□□□□ -0.08
SYNE2-214ENST00000554928 FCGRTP55899 365 aa14.58□□□□□ -0.08
SYNE2-214ENST00000554928 LBX2Q6XYB7 198 aa14.58□□□□□ -0.08
SYNE2-214ENST00000554928 GMCL1P1Q8NEA9 526 aa14.58□□□□□ -0.08
SYNE2-214ENST00000554928 GPRC5AQ8NFJ5 357 aa14.58□□□□□ -0.08
SYNE2-214ENST00000554928 ESR2Q92731 530 aa14.58□□□□□ -0.08
SYNE2-214ENST00000554928 RABGAP1Q9Y3P9 1069 aa14.58□□□□□ -0.08
SYNE2-214ENST00000554928 MYH4Q9Y623 1939 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 TNPO2O14787 897 aaKnown RBP14.57□□□□□ -0.08
SYNE2-214ENST00000554928 SLC27A2O14975 620 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 TMEM132BQ14DG7 1078 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 NECTIN1Q15223 517 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 KCTD1Q719H9 257 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 CHST3Q7LGC8 479 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 REPS2Q8NFH8 660 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 SENP2Q9HC62 589 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 PPP1R9AQ9ULJ8 1098 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 ADAMTS5Q9UNA0 930 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 MYPNQ86TC9 1320 aa14.57□□□□□ -0.08
SYNE2-214ENST00000554928 A0A0G2JMZ2 1700 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 BMP3P12645 472 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 FLT3LGP49771 235 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 ANTXR2P58335 489 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 SNAP25P60880 206 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 PKN2Q16513 984 aaKnown RBP14.56□□□□□ -0.08
SYNE2-214ENST00000554928 CREB3L3Q68CJ9 461 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 TTBK2Q6IQ55 1244 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 ENAHQ8N8S7 591 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-214ENST00000554928 SH3TC2Q8TF17 1288 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 SLF1Q9BQI6 1058 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 MOV10L1Q9BXT6 1211 aaKnown RBP14.56□□□□□ -0.08
SYNE2-214ENST00000554928 GPHNQ9NQX3 736 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-214ENST00000554928 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 GJD2Q9UKL4 321 aa14.56□□□□□ -0.08
SYNE2-214ENST00000554928 PARP14Q460N5 1801 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 CCDC85CA6NKD9 419 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 TMEM232C9JQI7 657 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 VWA5AO00534 786 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 TOP1P11387 765 aaKnown RBP14.55□□□□□ -0.08
SYNE2-214ENST00000554928 TAL1P17542 331 aaPredicted RBP14.55□□□□□ -0.08
SYNE2-214ENST00000554928 SEC23AQ15436 765 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 MB21D2Q8IYB1 491 aaPredicted RBP14.55□□□□□ -0.08
SYNE2-214ENST00000554928 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 GTF3C2Q8WUA4 911 aaPredicted RBP14.55□□□□□ -0.08
SYNE2-214ENST00000554928 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 GMCL1Q96IK5 515 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 ZSCAN10Q96SZ4 725 aaPredicted RBP14.55□□□□□ -0.08
SYNE2-214ENST00000554928 KRT23Q9C075 422 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 SPATC1LQ9H0A9 340 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 ISY1Q9ULR0 285 aaKnown RBP14.55□□□□□ -0.08
SYNE2-214ENST00000554928 SYNPO2Q9UMS6 1093 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 TNKSO95271 1327 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 FRMPD2Q68DX3 1309 aaPredicted RBP14.55□□□□□ -0.08
SYNE2-214ENST00000554928 CENPFP49454 3210 aa14.55□□□□□ -0.08
SYNE2-214ENST00000554928 MYCP01106 439 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-214ENST00000554928 ELNP15502 786 aa14.54□□□□□ -0.08
SYNE2-214ENST00000554928 SLC16A2P36021 539 aa14.54□□□□□ -0.08
SYNE2-214ENST00000554928 SLC1A4P43007 532 aa14.54□□□□□ -0.08
SYNE2-214ENST00000554928 PLS1Q14651 629 aa14.54□□□□□ -0.08
SYNE2-214ENST00000554928 GPR142Q7Z601 462 aa14.54□□□□□ -0.08
SYNE2-214ENST00000554928 CPVLQ9H3G5 476 aa14.54□□□□□ -0.08
SYNE2-214ENST00000554928 CNNM2Q9H8M5 875 aa14.54□□□□□ -0.08
SYNE2-214ENST00000554928 ZNF214Q9UL59 606 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-214ENST00000554928 MGAMO43451 1857 aa14.54□□□□□ -0.08
SYNE2-214ENST00000554928 GNRH1P01148 92 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 GOLGA8HP0CJ92 632 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 PDHBP11177 359 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 ERCC3P19447 782 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 ARHGEF6Q15052 776 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 CCDC96Q2M329 555 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 WDR78Q5VTH9 848 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 PLEKHH3Q7Z736 793 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 DGKHQ86XP1 1220 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 ANKS1AQ92625 1134 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 USP6NLQ92738 828 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 COA7Q96BR5 231 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 TTC14Q96N46 770 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 FEM1BQ9UK73 627 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 RIPK3Q9Y572 518 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 DOCK3Q8IZD9 2030 aa14.53□□□□□ -0.08
SYNE2-214ENST00000554928 PLXNB2O15031 1838 aa14.52□□□□□ -0.08
SYNE2-214ENST00000554928 SNHG28P0DPA3 235 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 CYP2B6P20813 491 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms