RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 PARP14Q460N5 1801 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 CCL15-CCL14A0A0B4J2E2 113 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 PARP1P09874 1014 aaKnown RBP17.31■□□□□ 0.36
PSMA6-208ENST00000554843 BMP3P12645 472 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 PDIA3P30101 505 aaKnown RBP17.31■□□□□ 0.36
PSMA6-208ENST00000554843 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.36
PSMA6-208ENST00000554843 MKRN3Q13064 507 aaKnown RBP17.31■□□□□ 0.36
PSMA6-208ENST00000554843 CCL15Q16663 113 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 RTN1Q16799 776 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 CCDC96Q2M329 555 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 SPICE1Q8N0Z3 855 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 CTCFLQ8NI51 663 aaPredicted RBP17.31■□□□□ 0.36
PSMA6-208ENST00000554843 BRI3BPQ8WY22 251 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 RBM28Q9NW13 759 aaKnown RBP17.31■□□□□ 0.36
PSMA6-208ENST00000554843 LIMCH1Q9UPQ0 1083 aa17.31■□□□□ 0.36
PSMA6-208ENST00000554843 PALM3A6NDB9 673 aaPredicted RBP17.3■□□□□ 0.36
PSMA6-208ENST00000554843 RAD21O60216 631 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 PLA2G6O60733 806 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 PFKFB2O60825 505 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 RXRAP19793 462 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 GNAQP50148 359 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 ME3Q16798 604 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 FAM83BQ5T0W9 1011 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 GADL1Q6ZQY3 521 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
PSMA6-208ENST00000554843 ANKRD23Q86SG2 305 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 FANCBQ8NB91 859 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 ZSCAN31Q96LW9 406 aaPredicted RBP17.3■□□□□ 0.36
PSMA6-208ENST00000554843 RPAP3Q9H6T3 665 aaPredicted RBP17.3■□□□□ 0.36
PSMA6-208ENST00000554843 SH2B1Q9NRF2 756 aaPredicted RBP17.3■□□□□ 0.36
PSMA6-208ENST00000554843 MAD2L2Q9UI95 211 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 NAP1L2Q9ULW6 460 aaPredicted RBP17.3■□□□□ 0.36
PSMA6-208ENST00000554843 MTMR7Q9Y216 660 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 SLC45A1Q9Y2W3 748 aa17.3■□□□□ 0.36
PSMA6-208ENST00000554843 MYPNQ86TC9 1320 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 CCDC196A0A1B0GTZ2 297 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L15C9J2P7 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L13C9JLJ4 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 LARGE1O95461 756 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
PSMA6-208ENST00000554843 INHBEP58166 350 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.36
PSMA6-208ENST00000554843 TREML2Q5T2D2 321 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 GPAT2Q6NUI2 795 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 RAB11FIP4Q86YS3 637 aa17.29■□□□□ 0.36
PSMA6-208ENST00000554843 REM2Q8IYK8 340 aaPredicted RBP17.29■□□□□ 0.36
PSMA6-208ENST00000554843 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
PSMA6-208ENST00000554843 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
PSMA6-208ENST00000554843 ZCCHC17Q9NP64 241 aaKnown RBP17.29■□□□□ 0.36
PSMA6-208ENST00000554843 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
PSMA6-208ENST00000554843 A0A0G2JMZ2 1700 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 RLFQ13129 1914 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 HTRA3P83110 453 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 BTNL9Q6UXG8 535 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 TMTC3Q6ZXV5 915 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 KCTD1Q719H9 257 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 FAM160B2Q86V87 743 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 GTF3C6Q969F1 213 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 LZTS2Q9BRK4 669 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 SLKQ9H2G2 1235 aaPredicted RBP17.28■□□□□ 0.36
PSMA6-208ENST00000554843 FEM1BQ9UK73 627 aa17.28■□□□□ 0.36
PSMA6-208ENST00000554843 WDR33Q9C0J8 1336 aaKnown RBP17.27■□□□□ 0.36
PSMA6-208ENST00000554843 BTBD19C9JJ37 291 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 GOLGA8HP0CJ92 632 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 SMARCA1P28370 1054 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 STAT2P52630 851 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 SCRN1Q12765 414 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 CATSPERGQ6ZRH7 1159 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 TMX3Q96JJ7 454 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 TANGO6Q9C0B7 1094 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 FAM217BQ9NTX9 383 aaPredicted RBP17.27■□□□□ 0.36
PSMA6-208ENST00000554843 PNMA3Q9UL41 463 aa17.27■□□□□ 0.36
PSMA6-208ENST00000554843 TMEM232C9JQI7 657 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 KLRF2D3W0D1 207 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 K7ELQ4 463 aaPredicted RBP17.26■□□□□ 0.35
PSMA6-208ENST00000554843 CDC27P30260 824 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 MAP2K2P36507 400 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 KIF23Q02241 960 aaPredicted RBP17.26■□□□□ 0.35
PSMA6-208ENST00000554843 ST3GAL1Q11201 340 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 GRM1Q13255 1194 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 CHURC1Q8WUH1 139 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 PTPN18Q99952 460 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 SLF1Q9BQI6 1058 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 GPCPD1Q9NPB8 672 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 PPP1R9AQ9ULJ8 1098 aa17.26■□□□□ 0.35
PSMA6-208ENST00000554843 ISY1Q9ULR0 285 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms