RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 GSDMAQ96QA5 445 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 PP2D1A8MPX8 630 aa17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 TUBB4AP04350 444 aa17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 TEX35Q5T0J7 233 aa17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 ZNF771Q7L3S4 317 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 APTXQ7Z2E3 356 aaKnown RBP17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 PNMA1Q8ND90 353 aa17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 SH3RF3Q8TEJ3 882 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 CCDC12Q8WUD4 166 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 NOL10Q9BSC4 688 aaKnown RBP17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 CPVLQ9H3G5 476 aa17.77■□□□□ 0.44
ARHGEF40-203ENST00000554514 PES1O00541 588 aaKnown RBP17.77■□□□□ 0.43
ARHGEF40-203ENST00000554514 GOLGA8HP0CJ92 632 aa17.77■□□□□ 0.43
ARHGEF40-203ENST00000554514 GRIK5Q16478 980 aa17.77■□□□□ 0.43
ARHGEF40-203ENST00000554514 FILIP1LQ4L180 1135 aa17.77■□□□□ 0.43
ARHGEF40-203ENST00000554514 MTRQ99707 1265 aa17.77■□□□□ 0.43
ARHGEF40-203ENST00000554514 NYXQ9GZU5 481 aa17.77■□□□□ 0.43
ARHGEF40-203ENST00000554514 STX8Q9UNK0 236 aa17.77■□□□□ 0.43
ARHGEF40-203ENST00000554514 GDAQ9Y2T3 454 aa17.77■□□□□ 0.43
ARHGEF40-203ENST00000554514 SEMA3EO15041 775 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 PCP11498 1178 aaKnown RBP17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 RAD9BQ6WBX8 426 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 HEATR3Q7Z4Q2 680 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 ANKRD2Q9GZV1 360 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 IL17RBQ9NRM6 502 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 TAB2Q9NYJ8 693 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 A0A1B0GUL6 1792 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 N4BP3O15049 544 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 KIF5BP33176 963 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 TPTE2Q6XPS3 522 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 BLIDQ8IZY5 108 aa17.76■□□□□ 0.43
ARHGEF40-203ENST00000554514 SEC31AO94979 1220 aaKnown RBP17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 H2AFXP16104 143 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 TYW1BQ6NUM6 668 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 TGFBRAP1Q8WUH2 860 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 C8orf37Q96NL8 207 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 GTPBP4Q9BZE4 634 aaKnown RBP17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 SCN7AQ01118 1682 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 TADA3O75528 432 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 LDHBP07195 334 aaKnown RBP17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 CCDC175P0C221 793 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 STAT6P42226 847 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 E2F4Q16254 413 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 MAPKAPK5Q8IW41 473 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 TSPY3P0CV98 308 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 TSPY8P0CW00 308 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 FXR1P51114 621 aaKnown RBP eCLIP17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 KRT31Q15323 416 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 CDKAL1Q5VV42 579 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 PDXDC2PQ6P474 469 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 NELFBQ8WX92 580 aa17.75■□□□□ 0.43
ARHGEF40-203ENST00000554514 CCDC194A0A1B0GVG4 234 aa17.74■□□□□ 0.43
ARHGEF40-203ENST00000554514 PPP2R3AQ06190 1150 aa17.74■□□□□ 0.43
ARHGEF40-203ENST00000554514 INF2Q27J81 1249 aa17.74■□□□□ 0.43
ARHGEF40-203ENST00000554514 ZBTB9Q96C00 473 aa17.74■□□□□ 0.43
ARHGEF40-203ENST00000554514 EEF2KMTQ96G04 330 aa17.74■□□□□ 0.43
ARHGEF40-203ENST00000554514 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
ARHGEF40-203ENST00000554514 BARGINQ6ZT62 677 aa17.74■□□□□ 0.43
ARHGEF40-203ENST00000554514 TRIM49BA6NDI0 452 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 GOLGA6L9A6NEM1 432 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 NFIXQ14938 502 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 UTP14CQ5TAP6 766 aaKnown RBP17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 CTAGE1Q96RT6 745 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 NUP88Q99567 741 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 RREB1Q92766 1687 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 MFAP3LO75121 409 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 RPN1P04843 607 aaKnown RBP17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 GYPCP04921 128 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 TXLNAP40222 546 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 PAK1Q13153 545 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 ACRBPQ8NEB7 543 aa17.73■□□□□ 0.43
ARHGEF40-203ENST00000554514 GTPBP6O43824 516 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 C12orf60Q5U649 245 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 TMCO3Q6UWJ1 677 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 ZNF444Q8N0Y2 327 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 KIFC2Q96AC6 838 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 NGLY1Q96IV0 654 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 PANX2Q96RD6 677 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 TMEM60Q9H2L4 133 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 CCNL1Q9UK58 526 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 PCDHA4Q9UN74 947 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 COL22A1Q8NFW1 1626 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 CALML3P27482 149 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 SBK1Q52WX2 424 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 WWC2Q6AWC2 1192 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 ARHGEF1Q92888 912 aaKnown RBP17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 SRRTQ9BXP5 876 aaKnown RBP17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 ARGLU1Q9NWB6 273 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 RTCBQ9Y3I0 505 aaKnown RBP17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 ADGRG1Q9Y653 693 aa17.72■□□□□ 0.43
ARHGEF40-203ENST00000554514 EFCAB8A8MWE9 144 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 RNF225M0QZC1 329 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 TPM1P09493 284 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 PRCPP42785 496 aa17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 SPTY2D1Q68D10 685 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF40-203ENST00000554514 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms