RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 BRI3BPQ8WY22 251 aa21.29■■□□□ 1
PPP4R3A-203ENST00000554511 ERO1AQ96HE7 468 aa21.29■■□□□ 1
PPP4R3A-203ENST00000554511 VCPKMTQ9H867 229 aa21.29■■□□□ 1
PPP4R3A-203ENST00000554511 NAP1L2Q9ULW6 460 aaPredicted RBP21.29■■□□□ 1
PPP4R3A-203ENST00000554511 GREB1LQ9C091 1923 aaPredicted RBP21.28■■□□□ 1
PPP4R3A-203ENST00000554511 ATAD5Q96QE3 1844 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 CCL15-CCL14A0A0B4J2E2 113 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 DDAH1O94760 285 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 CETPP11597 493 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 RCAN1P53805 252 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 AK2P54819 239 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 MTMR2Q13614 643 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 PPP2R5BQ15173 497 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 CCL15Q16663 113 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 SH3D19Q5HYK7 790 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 SLFN13Q68D06 897 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 LRRC47Q8N1G4 583 aaKnown RBP21.28■■□□□ 1
PPP4R3A-203ENST00000554511 CD99L2Q8TCZ2 262 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 ZNF274Q96GC6 653 aaPredicted RBP21.28■■□□□ 1
PPP4R3A-203ENST00000554511 ZSCAN31Q96LW9 406 aaPredicted RBP21.28■■□□□ 1
PPP4R3A-203ENST00000554511 MAP3K14Q99558 947 aa21.28■■□□□ 1
PPP4R3A-203ENST00000554511 KLF18A0A0U1RQI7 1052 aa21.27■■□□□ 1
PPP4R3A-203ENST00000554511 ZBTB43O43298 467 aa21.27■■□□□ 1
PPP4R3A-203ENST00000554511 KIF5BP33176 963 aa21.27■■□□□ 1
PPP4R3A-203ENST00000554511 EVCP57679 992 aa21.27■■□□□ 1
PPP4R3A-203ENST00000554511 SP3Q02447 781 aa21.27■■□□□ 1
PPP4R3A-203ENST00000554511 COL9A3Q14050 684 aaPredicted RBP21.27■■□□□ 1
PPP4R3A-203ENST00000554511 TOB2Q14106 344 aaPredicted RBP21.27■■□□□ 1
PPP4R3A-203ENST00000554511 ZNF654Q8IZM8 581 aa21.27■■□□□ 1
PPP4R3A-203ENST00000554511 DCAF4Q8WV16 495 aa21.27■■□□□ 1
PPP4R3A-203ENST00000554511 GPHNQ9NQX3 736 aaPredicted RBP21.27■■□□□ 1
PPP4R3A-203ENST00000554511 LIMCH1Q9UPQ0 1083 aa21.27■■□□□ 1
PPP4R3A-203ENST00000554511 A0A0G2JLL6 359 aaPredicted RBP21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 CCDC196A0A1B0GTZ2 297 aa21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 SLC1A4P43007 532 aa21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 APOBRQ0VD83 1088 aa21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 PABPC4Q13310 644 aaKnown RBP eCLIP21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 ZYXQ15942 572 aaKnown RBP21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 PRRT2Q7Z6L0 340 aaPredicted RBP21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 PROCA1Q8NCQ7 364 aaPredicted RBP21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 CTCFLQ8NI51 663 aaPredicted RBP21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 NUP133Q8WUM0 1156 aa21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 GMCL1Q96IK5 515 aa21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 C12orf42Q96LP6 360 aa21.26■□□□□ 0.99
PPP4R3A-203ENST00000554511 WDR46O15213 610 aaKnown RBP21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 GNAQP50148 359 aa21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 HMGCS2P54868 508 aa21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 TAF1CQ15572 869 aaPredicted RBP21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 GPATCH4Q5T3I0 446 aaKnown RBP21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 APOA5Q6Q788 366 aa21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 FAM43AQ8N2R8 423 aa21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 EFCC1Q9HA90 598 aa21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 PTPN22Q9Y2R2 807 aa21.25■□□□□ 0.99
PPP4R3A-203ENST00000554511 NDUFB10O96000 172 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 PARP1P09874 1014 aaKnown RBP21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 BMP3P12645 472 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 TROAPQ12815 778 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 ASPRV1Q53RT3 343 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 GADL1Q6ZQY3 521 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 SENP2Q9HC62 589 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 ZFYVE28Q9HCC9 887 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 SH2B1Q9NRF2 756 aaPredicted RBP21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 EMILIN3Q9NT22 766 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 RBM28Q9NW13 759 aaKnown RBP21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 BRPF3Q9ULD4 1205 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 ISY1Q9ULR0 285 aaKnown RBP21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 MTMR7Q9Y216 660 aa21.24■□□□□ 0.99
PPP4R3A-203ENST00000554511 GOLGA8BA8MQT2 603 aa21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 DHX16O60231 1041 aaKnown RBP21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 PDHBP11177 359 aa21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 METAP2P50579 478 aaKnown RBP eCLIP21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 CAP1Q01518 475 aa21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 CCDC96Q2M329 555 aa21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 FANCBQ8NB91 859 aa21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 LZTS2Q9BRK4 669 aa21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 SLKQ9H2G2 1235 aaPredicted RBP21.23■□□□□ 0.99
PPP4R3A-203ENST00000554511 HTTP42858 3142 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 GOLGA8AA7E2F4 631 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 SNHG28P0DPA3 235 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 PDIA3P30101 505 aaKnown RBP21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 GRM4Q14833 912 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 CPLX2Q6PUV4 134 aaKnown RBP21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 MICU3Q86XE3 530 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 SPICE1Q8N0Z3 855 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 CHURC1Q8WUH1 139 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 SNX21Q969T3 373 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 TPCN1Q9ULQ1 816 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 PDE4DIPQ5VU43 2346 aa21.22■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L15C9J2P7 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L13C9JLJ4 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L11C9JVI0 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L18D6R9N7 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L22D6RA61 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L17D6RBQ6 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L19D6RCP7 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L20D6RJB6 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 USP17L24Q0WX57 530 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 RTN1Q16799 776 aa21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 NOL8Q76FK4 1167 aaKnown RBP21.21■□□□□ 0.99
PPP4R3A-203ENST00000554511 FAM160B2Q86V87 743 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms