RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RNF19AQ9NV58 838 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 SLAMF8Q9P0V8 285 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 PLCH2O75038 1416 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 IQGAP1P46940 1657 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 DNAJC25-GNG10A0A024R161 153 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 KRTAP9-7A8MTY7 169 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 C1QTNF9P0C862 333 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 CCDC85BQ15834 202 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-227ENST00000554491 RALGPS1Q5JS13 557 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 THAP5Q7Z6K1 395 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 LRRC56Q8IYG6 542 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-227ENST00000554491 NSUN3Q9H649 340 aaKnown RBP6.08□□□□□ -1.44
ATXN3-227ENST00000554491 TJP2Q9UDY2 1190 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 XIRP1Q702N8 1843 aaKnown RBP6.08□□□□□ -1.44
ATXN3-227ENST00000554491 MLH3Q9UHC1 1453 aa6.08□□□□□ -1.44
ATXN3-227ENST00000554491 KIF14Q15058 1648 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 ESR1P03372 595 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 HMGB1P09429 215 aaKnown RBP6.07□□□□□ -1.44
ATXN3-227ENST00000554491 ERVFC1P60507 584 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 MAP3K11Q16584 847 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 ZNF746Q6NUN9 644 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-227ENST00000554491 TTC6Q86TZ1 520 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 DHX37Q8IY37 1157 aaKnown RBP6.07□□□□□ -1.44
ATXN3-227ENST00000554491 TOX2Q96NM4 488 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 PPP1R16BQ96T49 567 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 ABCC1P33527 1531 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 LRRC7Q96NW7 1537 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 A2ML1A8K2U0 1454 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 DEPDC5O75140 1603 aa6.07□□□□□ -1.44
ATXN3-227ENST00000554491 ARHGAP5Q13017 1502 aa6.06□□□□□ -1.44
ATXN3-227ENST00000554491 CDK13Q14004 1512 aaKnown RBP6.06□□□□□ -1.44
ATXN3-227ENST00000554491 CDC42BPBQ9Y5S2 1711 aa6.06□□□□□ -1.44
ATXN3-227ENST00000554491 EIF4BP23588 611 aaKnown RBP6.06□□□□□ -1.44
ATXN3-227ENST00000554491 GNA15P30679 374 aa6.06□□□□□ -1.44
ATXN3-227ENST00000554491 ANKLE2Q86XL3 938 aa6.06□□□□□ -1.44
ATXN3-227ENST00000554491 PREX2Q70Z35 1606 aa6.06□□□□□ -1.44
ATXN3-227ENST00000554491 PGRP06401 933 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 CYP7A1P22680 504 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 KIR3DL1P43629 444 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 HK2P52789 917 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 RPS26P62854 115 aaKnown RBP6.05□□□□□ -1.44
ATXN3-227ENST00000554491 RBM10P98175 930 aaKnown RBP6.05□□□□□ -1.44
ATXN3-227ENST00000554491 AGMOQ6ZNB7 445 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 MRPL41Q8IXM3 137 aaKnown RBP6.05□□□□□ -1.44
ATXN3-227ENST00000554491 FBXO15Q8NCQ5 510 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-227ENST00000554491 TMEM87BQ96K49 555 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 Q96M66 194 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 ADAMTS10Q9H324 1103 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 PLXNC1O60486 1568 aa6.05□□□□□ -1.44
ATXN3-227ENST00000554491 ZC3H13Q5T200 1668 aaKnown RBP6.04□□□□□ -1.44
ATXN3-227ENST00000554491 PRXQ9BXM0 1461 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 ZSCAN22P10073 491 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-227ENST00000554491 TFE3P19532 575 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-227ENST00000554491 LMNB1P20700 586 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-227ENST00000554491 LIG3P49916 1009 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 DNAJB8Q8NHS0 232 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 ABHD4Q8TB40 342 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 CCDC136Q96JN2 1154 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 FRMD6Q96NE9 622 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 DUSP15Q9H1R2 295 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-227ENST00000554491 DCP1AQ9NPI6 582 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-227ENST00000554491 TMEM59LQ9UK28 342 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 ROBO1Q9Y6N7 1651 aa6.04□□□□□ -1.44
ATXN3-227ENST00000554491 PLEKHD1A6NEE1 506 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 NPIPB6E9PJ23 425 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 NFIBO00712 420 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 PRPF40AO75400 957 aaKnown RBP6.03□□□□□ -1.44
ATXN3-227ENST00000554491 RAC2P15153 192 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 TRIM26Q12899 539 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-227ENST00000554491 MEI1Q5TIA1 1274 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 TMPRSS7Q7RTY8 843 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 CREG2Q8IUH2 290 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 ZSCAN18Q8TBC5 510 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-227ENST00000554491 PIWIL2Q8TC59 973 aaKnown RBP6.03□□□□□ -1.44
ATXN3-227ENST00000554491 ACSF2Q96CM8 615 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-227ENST00000554491 CCDC120Q96HB5 630 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 COX4I2Q96KJ9 171 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 MIR1-1HGQ9H1L0 117 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 TLR6Q9Y2C9 796 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 TACC3Q9Y6A5 838 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 AK5Q9Y6K8 562 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 ZMYM3Q14202 1370 aa6.03□□□□□ -1.44
ATXN3-227ENST00000554491 KCNA1Q09470 495 aa6.02□□□□□ -1.45
ATXN3-227ENST00000554491 GAB4Q2WGN9 574 aa6.02□□□□□ -1.45
ATXN3-227ENST00000554491 SLC6A19Q695T7 634 aa6.02□□□□□ -1.45
ATXN3-227ENST00000554491 MCATQ8IVS2 390 aaKnown RBP6.02□□□□□ -1.45
ATXN3-227ENST00000554491 PPP1R13LQ8WUF5 828 aa6.02□□□□□ -1.45
ATXN3-227ENST00000554491 MYLIPQ8WY64 445 aa6.02□□□□□ -1.45
ATXN3-227ENST00000554491 NAP1L5Q96NT1 182 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-227ENST00000554491 DUSP9Q99956 384 aaKnown RBP6.02□□□□□ -1.45
ATXN3-227ENST00000554491 EPB41L4BQ9H329 900 aa6.02□□□□□ -1.45
ATXN3-227ENST00000554491 SRCAPQ6ZRS2 3230 aa6.02□□□□□ -1.45
ATXN3-227ENST00000554491 MED14O60244 1454 aa6.02□□□□□ -1.45
ATXN3-227ENST00000554491 INO80Q9ULG1 1556 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-227ENST00000554491 NPHP4O75161 1426 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-227ENST00000554491 HPXP02790 462 aa6.01□□□□□ -1.45
ATXN3-227ENST00000554491 TPP2P29144 1249 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms