RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 TAB3Q8N5C8 712 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-225ENST00000554214 HDAC8Q9BY41 377 aa7.8□□□□□ -1.16
ATXN3-225ENST00000554214 SUCOQ9UBS9 1254 aaKnown RBP7.8□□□□□ -1.16
ATXN3-225ENST00000554214 CC2D2AQ9P2K1 1620 aa7.8□□□□□ -1.16
ATXN3-225ENST00000554214 CECR2Q9BXF3 1484 aa7.8□□□□□ -1.16
ATXN3-225ENST00000554214 SSU72P8A0A1W2PR75 194 aa7.79□□□□□ -1.16
ATXN3-225ENST00000554214 RAC2P15153 192 aa7.79□□□□□ -1.16
ATXN3-225ENST00000554214 GJA8P48165 433 aa7.79□□□□□ -1.16
ATXN3-225ENST00000554214 EIF6P56537 245 aaKnown RBP7.79□□□□□ -1.16
ATXN3-225ENST00000554214 ERVFC1P60507 584 aa7.79□□□□□ -1.16
ATXN3-225ENST00000554214 AUHQ13825 339 aaKnown RBP7.79□□□□□ -1.16
ATXN3-225ENST00000554214 TMEM67Q5HYA8 995 aa7.79□□□□□ -1.16
ATXN3-225ENST00000554214 UNC5AQ6ZN44 842 aa7.79□□□□□ -1.16
ATXN3-225ENST00000554214 ZNF655Q8N720 491 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-225ENST00000554214 TCTN2Q96GX1 697 aa7.79□□□□□ -1.16
ATXN3-225ENST00000554214 INPP5FQ9Y2H2 1132 aa7.79□□□□□ -1.16
ATXN3-225ENST00000554214 PRAMEF1O95521 474 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 ZGLP1P0C6A0 271 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 GUCY2CP25092 1073 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 NASPP49321 788 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-225ENST00000554214 TEKQ02763 1124 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 OGFOD2Q6N063 350 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 LSRQ86X29 649 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-225ENST00000554214 CCDC144CPQ8IYA2 1237 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 ABHD4Q8TB40 342 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 MYLIPQ8WY64 445 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 DHX38Q92620 1227 aaKnown RBP7.78□□□□□ -1.16
ATXN3-225ENST00000554214 CCSER2Q9H7U1 834 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 MINPP1Q9UNW1 487 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 PCDHB12Q9Y5F1 795 aa7.78□□□□□ -1.16
ATXN3-225ENST00000554214 ZNF503-AS2A6NEH8 195 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 C9IYK1 514 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 SIGLEC6O43699 453 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 GLI1P08151 1106 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 PMS1P54277 932 aaKnown RBP7.77□□□□□ -1.17
ATXN3-225ENST00000554214 ZYXQ15942 572 aaKnown RBP7.77□□□□□ -1.17
ATXN3-225ENST00000554214 RNF111Q6ZNA4 994 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 C7orf61Q8IZ16 206 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 CPLX3Q8WVH0 158 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 SRRTQ9BXP5 876 aaKnown RBP7.77□□□□□ -1.17
ATXN3-225ENST00000554214 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 CHST7Q9NS84 486 aa7.77□□□□□ -1.17
ATXN3-225ENST00000554214 HPXP02790 462 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 TP53P04637 393 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-225ENST00000554214 RPL10P27635 214 aaKnown RBP7.76□□□□□ -1.17
ATXN3-225ENST00000554214 ERCC5P28715 1186 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-225ENST00000554214 TRHRP34981 398 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-225ENST00000554214 GIPRP48546 466 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 RBM25P49756 843 aaKnown RBP7.76□□□□□ -1.17
ATXN3-225ENST00000554214 PCBP3P57721 371 aaKnown RBP7.76□□□□□ -1.17
ATXN3-225ENST00000554214 OXR1Q8N573 874 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 LINC00116Q8NCU8 138 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 LIN37Q96GY3 246 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-225ENST00000554214 SEC16BQ96JE7 1060 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 FOXP3Q9BZS1 431 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 GFOD1Q9NXC2 390 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 FAM53CQ9NYF3 392 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 PODXL2Q9NZ53 605 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 TCFL5Q9UL49 500 aa7.76□□□□□ -1.17
ATXN3-225ENST00000554214 MEIS1O00470 390 aa7.75□□□□□ -1.17
ATXN3-225ENST00000554214 SYPP08247 313 aa7.75□□□□□ -1.17
ATXN3-225ENST00000554214 TDRD10Q5VZ19 366 aaKnown RBP7.75□□□□□ -1.17
ATXN3-225ENST00000554214 PDZD8Q8NEN9 1154 aa7.75□□□□□ -1.17
ATXN3-225ENST00000554214 C19orf44Q9H6X5 657 aa7.75□□□□□ -1.17
ATXN3-225ENST00000554214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.17
ATXN3-225ENST00000554214 EBF1Q9UH73 591 aa7.75□□□□□ -1.17
ATXN3-225ENST00000554214 ZNF281Q9Y2X9 895 aa7.75□□□□□ -1.17
ATXN3-225ENST00000554214 LRRC10BA6NIK2 292 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-225ENST00000554214 TCF3P15923 654 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 DUSP4Q13115 394 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 ANKRD39Q53RE8 183 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 AXDND1Q5T1B0 1012 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-225ENST00000554214 MPZL3Q6UWV2 235 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 WAPLQ7Z5K2 1190 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 SPPL2CQ8IUH8 684 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 POU5F2Q8N7G0 328 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 OR6P1Q8NGX9 317 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 FAM86C1Q9NVL1 165 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 ZMYM5Q9UJ78 669 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 ZNF214Q9UL59 606 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-225ENST00000554214 LTBP3Q9NS15 1303 aa7.74□□□□□ -1.17
ATXN3-225ENST00000554214 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-225ENST00000554214 MLANAQ16655 118 aa7.73□□□□□ -1.17
ATXN3-225ENST00000554214 BBS9Q3SYG4 887 aa7.73□□□□□ -1.17
ATXN3-225ENST00000554214 DCAF15Q66K64 600 aa7.73□□□□□ -1.17
ATXN3-225ENST00000554214 PPFIBP1Q86W92 1011 aa7.73□□□□□ -1.17
ATXN3-225ENST00000554214 LINC01599Q8WXQ3 324 aa7.73□□□□□ -1.17
ATXN3-225ENST00000554214 SMARCC1Q92922 1105 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-225ENST00000554214 SP110Q9HB58 689 aa7.73□□□□□ -1.17
ATXN3-225ENST00000554214 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
ATXN3-225ENST00000554214 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
ATXN3-225ENST00000554214 A0A1W2PQH9 124 aa7.72□□□□□ -1.17
ATXN3-225ENST00000554214 FITM1A5D6W6 292 aa7.72□□□□□ -1.17
ATXN3-225ENST00000554214 SHOXO15266 292 aa7.72□□□□□ -1.17
ATXN3-225ENST00000554214 FKTNO75072 461 aa7.72□□□□□ -1.17
ATXN3-225ENST00000554214 FARP2O94887 1054 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-225ENST00000554214 PPP2R5EQ16537 467 aa7.72□□□□□ -1.17
ATXN3-225ENST00000554214 GNPTABQ3T906 1256 aa7.72□□□□□ -1.17
ATXN3-225ENST00000554214 NOL9Q5SY16 702 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms