RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 DOCK1Q14185 1865 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 VPS37CA5D8V6 355 aaPredicted RBP8.85□□□□□ -0.99
TDP1-209ENST00000554180 USP17L10C9JJH3 530 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 PLA2G6O60733 806 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 F13A1P00488 732 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 BMP3P12645 472 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 SCG2P13521 617 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 PTPRAP18433 802 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 TRIM29Q14134 588 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 PKN1Q16512 942 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 PFKFB3Q16875 520 aaPredicted RBP8.85□□□□□ -0.99
TDP1-209ENST00000554180 CCDC96Q2M329 555 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 BTNL9Q6UXG8 535 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 ARMC9Q7Z3E5 817 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 ANKRD13AQ8IZ07 590 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 CMTR1Q8N1G2 835 aaKnown RBP8.85□□□□□ -0.99
TDP1-209ENST00000554180 ZNF280CQ8ND82 737 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 ACER1Q8TDN7 264 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 TNPO1Q92973 898 aaKnown RBP8.85□□□□□ -0.99
TDP1-209ENST00000554180 RRP36Q96EU6 259 aaKnown RBP8.85□□□□□ -0.99
TDP1-209ENST00000554180 FEZ1Q99689 392 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 ZSCAN16Q9H4T2 348 aaPredicted RBP8.85□□□□□ -0.99
TDP1-209ENST00000554180 SH3GLB2Q9NR46 395 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 SEC63Q9UGP8 760 aaKnown RBP8.85□□□□□ -0.99
TDP1-209ENST00000554180 CLEC11AQ9Y240 323 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 V9GY48 417 aaPredicted RBP8.85□□□□□ -0.99
TDP1-209ENST00000554180 PAPPA2Q9BXP8 1791 aa8.85□□□□□ -0.99
TDP1-209ENST00000554180 MYH4Q9Y623 1939 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 C19orf81C9J6K1 198 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 WDR46O15213 610 aaKnown RBP8.84□□□□□ -0.99
TDP1-209ENST00000554180 CYTH3O43739 400 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 POTEIP0CG38 1075 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 POTEJP0CG39 1038 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 GOLGA8HP0CJ92 632 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 ECE1P42892 770 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 BACE1P56817 501 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 VGLL4Q14135 290 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 SLC35G1Q2M3R5 365 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 KRT40Q6A162 431 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.84□□□□□ -0.99
TDP1-209ENST00000554180 KCTD1Q719H9 257 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 RASGRP2Q7LDG7 609 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 CCDC82Q8N4S0 544 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 CCDC148Q8NFR7 591 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 RBM46Q8TBY0 533 aaKnown RBP8.84□□□□□ -0.99
TDP1-209ENST00000554180 CCDC12Q8WUD4 166 aaPredicted RBP8.84□□□□□ -0.99
TDP1-209ENST00000554180 ZKSCAN4Q969J2 545 aaPredicted RBP8.84□□□□□ -0.99
TDP1-209ENST00000554180 MTMR8Q96EF0 704 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 C12orf42Q96LP6 360 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 GBP4Q96PP9 640 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 NMRK2Q9NPI5 230 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 MTMR7Q9Y216 660 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 SNCAIPQ9Y6H5 919 aa8.84□□□□□ -0.99
TDP1-209ENST00000554180 FRMPD2Q68DX3 1309 aaPredicted RBP8.83□□□□□ -1
TDP1-209ENST00000554180 POLR2AP24928 1970 aaKnown RBP8.83□□□□□ -1
TDP1-209ENST00000554180 ATAD5Q96QE3 1844 aa8.83□□□□□ -1
TDP1-209ENST00000554180 PNMA6FA0A0J9YX94 578 aa8.83□□□□□ -1
TDP1-209ENST00000554180 SPDYE5A6NIY4 337 aa8.83□□□□□ -1
TDP1-209ENST00000554180 TMEM232C9JQI7 657 aa8.83□□□□□ -1
TDP1-209ENST00000554180 ZBTB5O15062 677 aa8.83□□□□□ -1
TDP1-209ENST00000554180 RAD21O60216 631 aa8.83□□□□□ -1
TDP1-209ENST00000554180 MMP1P03956 469 aa8.83□□□□□ -1
TDP1-209ENST00000554180 CALML3P27482 149 aa8.83□□□□□ -1
TDP1-209ENST00000554180 STAT2P52630 851 aa8.83□□□□□ -1
TDP1-209ENST00000554180 PPATQ06203 517 aa8.83□□□□□ -1
TDP1-209ENST00000554180 TRAF1Q13077 416 aa8.83□□□□□ -1
TDP1-209ENST00000554180 MTMR2Q13614 643 aa8.83□□□□□ -1
TDP1-209ENST00000554180 SAFBQ15424 915 aaKnown RBP eCLIP8.83□□□□□ -1
TDP1-209ENST00000554180 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
TDP1-209ENST00000554180 LDLRAD1Q5T700 205 aa8.83□□□□□ -1
TDP1-209ENST00000554180 MAP1SQ66K74 1059 aaPredicted RBP8.83□□□□□ -1
TDP1-209ENST00000554180 GALNT17Q6IS24 598 aa8.83□□□□□ -1
TDP1-209ENST00000554180 PPP1R18Q6NYC8 613 aa8.83□□□□□ -1
TDP1-209ENST00000554180 BRAPQ7Z569 592 aa8.83□□□□□ -1
TDP1-209ENST00000554180 FAM160B2Q86V87 743 aa8.83□□□□□ -1
TDP1-209ENST00000554180 ERO1BQ86YB8 467 aa8.83□□□□□ -1
TDP1-209ENST00000554180 TEX2Q8IWB9 1127 aa8.83□□□□□ -1
TDP1-209ENST00000554180 CHURC1Q8WUH1 139 aa8.83□□□□□ -1
TDP1-209ENST00000554180 AIFM3Q96NN9 605 aa8.83□□□□□ -1
TDP1-209ENST00000554180 JMJD4Q9H9V9 463 aa8.83□□□□□ -1
TDP1-209ENST00000554180 BRMS1Q9HCU9 246 aa8.83□□□□□ -1
TDP1-209ENST00000554180 GPCPD1Q9NPB8 672 aa8.83□□□□□ -1
TDP1-209ENST00000554180 BARHL2Q9NY43 387 aa8.83□□□□□ -1
TDP1-209ENST00000554180 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.83□□□□□ -1
TDP1-209ENST00000554180 FEM1BQ9UK73 627 aa8.83□□□□□ -1
TDP1-209ENST00000554180 ZHX2Q9Y6X8 837 aa8.83□□□□□ -1
TDP1-209ENST00000554180 ESYT2A0FGR8 921 aa8.82□□□□□ -1
TDP1-209ENST00000554180 UBE2Q2LH0YL09 131 aa8.82□□□□□ -1
TDP1-209ENST00000554180 DTNBO60941 627 aa8.82□□□□□ -1
TDP1-209ENST00000554180 VCAM1P19320 739 aa8.82□□□□□ -1
TDP1-209ENST00000554180 U2AF2P26368 475 aaKnown RBP eCLIP8.82□□□□□ -1
TDP1-209ENST00000554180 KIF23Q02241 960 aaPredicted RBP8.82□□□□□ -1
TDP1-209ENST00000554180 SPP2Q13103 211 aa8.82□□□□□ -1
TDP1-209ENST00000554180 RESTQ13127 1097 aa8.82□□□□□ -1
TDP1-209ENST00000554180 PPIL2Q13356 520 aa8.82□□□□□ -1
TDP1-209ENST00000554180 PRKG1Q13976 671 aa8.82□□□□□ -1
TDP1-209ENST00000554180 TTLL12Q14166 644 aaPredicted RBP8.82□□□□□ -1
TDP1-209ENST00000554180 FAM83BQ5T0W9 1011 aa8.82□□□□□ -1
TDP1-209ENST00000554180 SYDE2Q5VT97 1194 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms