RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ITGB3BPQ13352 177 aaPredicted RBP10.65□□□□□ -0.7
SIX4-202ENST00000554079 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 KIAA0825Q8IV33 1275 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 MMGT1Q8N4V1 131 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 TEX9Q8N6V9 391 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 FAM227BQ96M60 508 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 SEC62Q99442 399 aaKnown RBP10.65□□□□□ -0.7
SIX4-202ENST00000554079 UBE2OQ9C0C9 1292 aaKnown RBP10.65□□□□□ -0.7
SIX4-202ENST00000554079 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
SIX4-202ENST00000554079 HMG20BQ9P0W2 317 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 HPSEQ9Y251 543 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 C2CD2Q9Y426 696 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 MED1Q15648 1581 aaPredicted RBP10.65□□□□□ -0.7
SIX4-202ENST00000554079 GMNCA6NCL1 334 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 ENC1O14682 589 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 UPP2O95045 317 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 CNGA1P29973 690 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 TUBP50607 506 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 INHBCP55103 352 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 PPP1R7Q15435 360 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 EZH2Q15910 746 aaKnown RBP10.65□□□□□ -0.71
SIX4-202ENST00000554079 DBN1Q16643 649 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 PABPC1LQ4VXU2 614 aaKnown RBP10.65□□□□□ -0.71
SIX4-202ENST00000554079 DPY19L2Q6NUT2 758 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 METTL16Q86W50 562 aaKnown RBP10.65□□□□□ -0.71
SIX4-202ENST00000554079 IQCKQ8N0W5 287 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 CCDC51Q96ER9 411 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 CAPZA3Q96KX2 299 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 FAM167BQ9BTA0 163 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 RANBP17Q9H2T7 1088 aaKnown RBP10.65□□□□□ -0.71
SIX4-202ENST00000554079 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 TRIM10Q9UDY6 481 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 NFE2L3Q9Y4A8 694 aa10.65□□□□□ -0.71
SIX4-202ENST00000554079 DDX60Q8IY21 1712 aaKnown RBP10.64□□□□□ -0.71
SIX4-202ENST00000554079 MYH2Q9UKX2 1941 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 M0R2C6 588 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 KIF3BO15066 747 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 TRAPPC3O43617 180 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 ATP2C2O75185 946 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 GSTA1P08263 222 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 VIMP08670 466 aaKnown RBP10.64□□□□□ -0.71
SIX4-202ENST00000554079 MYBL1P10243 752 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 GUCY1B3Q02153 619 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 ZNF268Q14587 947 aaPredicted RBP10.64□□□□□ -0.71
SIX4-202ENST00000554079 ZRSR2Q15696 482 aaKnown RBP10.64□□□□□ -0.71
SIX4-202ENST00000554079 PPFIBP1Q86W92 1011 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 CACNA2D3Q8IZS8 1091 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 CCDC63Q8NA47 563 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 ENOX1Q8TC92 643 aaKnown RBP10.64□□□□□ -0.71
SIX4-202ENST00000554079 HDAC7Q8WUI4 952 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 C8orf76Q96K31 380 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 MED15Q96RN5 788 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 ZWILCHQ9H900 591 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 PPANQ9NQ55 473 aaKnown RBP10.64□□□□□ -0.71
SIX4-202ENST00000554079 PANK4Q9NVE7 773 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 DMGDHQ9UI17 866 aaKnown RBP10.64□□□□□ -0.71
SIX4-202ENST00000554079 WWC3Q9ULE0 1092 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 SLC12A4Q9UP95 1085 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 ZNF510Q9Y2H8 683 aa10.64□□□□□ -0.71
SIX4-202ENST00000554079 REXO2Q9Y3B8 237 aaKnown RBP10.64□□□□□ -0.71
SIX4-202ENST00000554079 FAM237AA0A1B0GTK4 181 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 LRRC10BA6NIK2 292 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 N4BP3O15049 544 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 SURF6O75683 361 aaKnown RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 SYKP43405 635 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 ADAM9Q13443 819 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 ZNF572Q7Z3I7 529 aaPredicted RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 TMTC1Q8IUR5 882 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 FOXP4Q8IVH2 680 aaPredicted RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 ATP6V1G3Q96LB4 118 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 IQCGQ9H095 443 aaKnown RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 KIDINS220Q9ULH0 1771 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 DIP2CQ9Y2E4 1556 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 HMGB1P1B2RPK0 211 aaPredicted RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 ALDH1L1O75891 902 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 GYPCP04921 128 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 FXR1P51114 621 aaKnown RBP eCLIP10.63□□□□□ -0.71
SIX4-202ENST00000554079 MXRA7P84157 204 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 DEUP1Q05D60 604 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 DYNC1I2Q13409 638 aaKnown RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 LBRQ14739 615 aaKnown RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 SGSM1Q2NKQ1 1148 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 LONRF3Q496Y0 759 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 NUTM2DQ5VT03 806 aaPredicted RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 SYNE3Q6ZMZ3 975 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
SIX4-202ENST00000554079 MIPOL1Q8TD10 442 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 EVI5LQ96CN4 794 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 SLC12A6Q9UHW9 1150 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 CARMIL3Q8ND23 1372 aa10.63□□□□□ -0.71
SIX4-202ENST00000554079 CRB1P82279 1406 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 A0A0D9SFI3 127 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 LRRD1A4D1F6 860 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 CFAP73A6NFT4 308 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 GOLGA6L10A6NI86 522 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 CREB3O43889 395 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 PAEPP09466 180 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms