RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-209	ENST00000553889	MAGEF1	Q9HAY2	307 aa		10.51	□□□□□ -0.73
PRKCH-209	ENST00000553889	MKNK2	Q9HBH9	465 aa		10.51	□□□□□ -0.73
PRKCH-209	ENST00000553889	ATP6V0A2	Q9Y487	856 aa		10.51	□□□□□ -0.73
PRKCH-209	ENST00000553889	IGKV6D-41	A0A0C4DH26	115 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	FAM205C	A6NFA0	338 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	NPHP1	O15259	732 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	GTPBP6	O43824	516 aa	Predicted RBP	10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	TSPY3	P0CV98	308 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	TSPY8	P0CW00	308 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	SNHG28	P0DPA3	235 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	TNNT1	P13805	278 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	LMOD1	P29536	600 aa	Predicted RBP	10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	BTD	P43251	543 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	FKBP1A	P62942	108 aa	Known RBP	10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	EVX2	Q03828	476 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	DIXDC1	Q155Q3	683 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	SLC35G1	Q2M3R5	365 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	CDKAL1	Q5VV42	579 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	SPATA1	Q5VX52	437 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	PDXDC2P	Q6P474	469 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	HHIPL2	Q6UWX4	724 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	USP49	Q70CQ1	688 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	FILIP1	Q7Z7B0	1213 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	SYMPK	Q92797	1274 aa	Known RBP	10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	AK8	Q96MA6	479 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	MED15	Q96RN5	788 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	TMEM47	Q9BQJ4	181 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	CCSER1	Q9C0I3	900 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	FANCL	Q9NW38	375 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	POLL	Q9UGP5	575 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889	FLT1	P17948	1338 aa		10.5	□□□□□ -0.73
PRKCH-209	ENST00000553889		A0A087X0B3	334 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889		A0A1B0GTH6	734 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	STXBP3	O00186	592 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	FOXN1	O15353	648 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	PRR29	P0C7W0	189 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	ATP1A3	P13637	1013 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	NPR1	P16066	1061 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	NR1I3	Q14994	352 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	PTPN14	Q15678	1187 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	TPD52L1	Q16890	204 aa	Predicted RBP	10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	MEX3C	Q5U5Q3	659 aa	Known RBP	10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	E4F1	Q66K89	784 aa	Predicted RBP	10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	APTX	Q7Z2E3	356 aa	Known RBP	10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	KRT27	Q7Z3Y8	459 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	KRT25	Q7Z3Z0	450 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	TMC6	Q7Z403	805 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	TEX11	Q8IYF3	940 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	CCDC24	Q8N4L8	307 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	TGFBRAP1	Q8WUH2	860 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	ANKRD7	Q92527	254 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	DYNLL2	Q96FJ2	89 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	EPSTI1	Q96J88	318 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	CTAGE1	Q96RT6	745 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	RIOX1	Q9H6W3	641 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	QTRT2	Q9H974	415 aa	Known RBP	10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	SWAP70	Q9UH65	585 aa		10.49	□□□□□ -0.73
PRKCH-209	ENST00000553889	PPP1R3G	B7ZBB8	358 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	WNT7A	O00755	349 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	RIOK3	O14730	519 aa	Known RBP	10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	ARHGAP6	O43182	974 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	CYTH3	O43739	400 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	STX10	O60499	249 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	FECH	P22830	423 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	GNA11	P29992	359 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	ALDH1B1	P30837	517 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	PBX1	P40424	430 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	HDLBP	Q00341	1268 aa	Known RBP	10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	FMR1	Q06787	632 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	SPAG1	Q07617	926 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	KCNB1	Q14721	858 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	ARID5B	Q14865	1188 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	ZNF174	Q15697	407 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	COBLL1	Q53SF7	1204 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	SPECC1	Q5M775	1068 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	MFSD14B	Q5SR56	506 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	FAM182B	Q5T319	152 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	WWC2	Q6AWC2	1192 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	PPP1R18	Q6NYC8	613 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	PIK3AP1	Q6ZUJ8	805 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	TEX2	Q8IWB9	1127 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	PROM2	Q8N271	834 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	STAG2	Q8N3U4	1231 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	AKT1S1	Q96B36	256 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	EHD4	Q9H223	541 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	L2HGDH	Q9H9P8	463 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	INTS13	Q9NVM9	706 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	RMND1	Q9NWS8	449 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	PCDHA6	Q9UN73	950 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	NFE2L3	Q9Y4A8	694 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	DAGLA	Q9Y4D2	1042 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	PCDHA8	Q9Y5H6	950 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	MYH1	P12882	1939 aa		10.48	□□□□□ -0.73
PRKCH-209	ENST00000553889	ANKRD31	Q8N7Z5	1873 aa		10.47	□□□□□ -0.73
PRKCH-209	ENST00000553889	GREB1L	Q9C091	1923 aa	Predicted RBP	10.47	□□□□□ -0.73
PRKCH-209	ENST00000553889	USP17L3	A6NCW0	530 aa		10.47	□□□□□ -0.73
PRKCH-209	ENST00000553889	USP17L4	A6NCW7	530 aa		10.47	□□□□□ -0.73
PRKCH-209	ENST00000553889	GOLGA6L9	A6NEM1	432 aa		10.47	□□□□□ -0.73
PRKCH-209	ENST00000553889	KLRF2	D3W0D1	207 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms