RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 CTDNEP1O95476 244 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 HMGCS2P54868 508 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 FKBP1BP68106 108 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 LDLRAD1Q5T700 205 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 TTBK2Q6IQ55 1244 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 TMTC3Q6ZXV5 915 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 ERO1BQ86YB8 467 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
PRKCH-206ENST00000553830 GMCL1P1Q8NEA9 526 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 RBM46Q8TBY0 533 aaKnown RBP16.42■□□□□ 0.22
PRKCH-206ENST00000553830 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 SLC26A6Q9BXS9 759 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
PRKCH-206ENST00000553830 PASKQ96RG2 1323 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 NID2Q14112 1375 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 hCG_1642624A0A1W2PR95 340 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 SLC16A2P36021 539 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 RCAN1P53805 252 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 HUNKP57058 714 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 ZNF543Q08ER8 600 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 WDR18Q9BV38 432 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 VAT1LQ9HCJ6 419 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
PRKCH-206ENST00000553830 SPDYE5A6NIY4 337 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 CDKL5O76039 1030 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 BMP3P12645 472 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 GJB2P29033 226 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 BACE1P56817 501 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 SSRP1Q08945 709 aaKnown RBP16.4■□□□□ 0.22
PRKCH-206ENST00000553830 GADL1Q6ZQY3 521 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 NBPF11Q86T75 865 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 SRBD1Q8N5C6 995 aaKnown RBP16.4■□□□□ 0.22
PRKCH-206ENST00000553830 KIAA1683Q9H0B3 1180 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 EMILIN3Q9NT22 766 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
PRKCH-206ENST00000553830 ABT1Q9ULW3 272 aaKnown RBP16.4■□□□□ 0.22
PRKCH-206ENST00000553830 LOC285556D6RIA3 1793 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 PALM3A6NDB9 673 aaPredicted RBP16.39■□□□□ 0.21
PRKCH-206ENST00000553830 TMEM232C9JQI7 657 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 IRF6O14896 467 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 SNHG28P0DPA3 235 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 GJA5P36382 358 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 GNAQP50148 359 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 USP14P54578 494 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 AKAP17AQ02040 695 aaKnown RBP16.39■□□□□ 0.21
PRKCH-206ENST00000553830 PPATQ06203 517 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 FAM184AQ8NB25 1140 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.21
PRKCH-206ENST00000553830 GMCL1Q96IK5 515 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 MAP3K14Q99558 947 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 LLPHQ9BRT6 129 aaKnown RBP16.39■□□□□ 0.21
PRKCH-206ENST00000553830 TANGO6Q9C0B7 1094 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 ORC3Q9UBD5 711 aaPredicted RBP16.39■□□□□ 0.21
PRKCH-206ENST00000553830 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 CNTNAP5Q8WYK1 1306 aa16.39■□□□□ 0.21
PRKCH-206ENST00000553830 VCAM1P19320 739 aa16.38■□□□□ 0.21
PRKCH-206ENST00000553830 SNAP25P60880 206 aa16.38■□□□□ 0.21
PRKCH-206ENST00000553830 PPIL2Q13356 520 aa16.38■□□□□ 0.21
PRKCH-206ENST00000553830 NTRK3Q16288 839 aa16.38■□□□□ 0.21
PRKCH-206ENST00000553830 PAXIP1Q6ZW49 1069 aaPredicted RBP16.38■□□□□ 0.21
PRKCH-206ENST00000553830 HOMER1Q86YM7 354 aa16.38■□□□□ 0.21
PRKCH-206ENST00000553830 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
PRKCH-206ENST00000553830 WNK4Q96J92 1243 aa16.38■□□□□ 0.21
PRKCH-206ENST00000553830 RPAP3Q9H6T3 665 aaPredicted RBP16.38■□□□□ 0.21
PRKCH-206ENST00000553830 SYNPO2Q9UMS6 1093 aa16.38■□□□□ 0.21
PRKCH-206ENST00000553830 C19orf81C9J6K1 198 aa16.37■□□□□ 0.21
PRKCH-206ENST00000553830 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
PRKCH-206ENST00000553830 IFNAR1P17181 557 aa16.37■□□□□ 0.21
PRKCH-206ENST00000553830 GRM1Q13255 1194 aa16.37■□□□□ 0.21
PRKCH-206ENST00000553830 PPP2R5BQ15173 497 aa16.37■□□□□ 0.21
PRKCH-206ENST00000553830 SLC35G1Q2M3R5 365 aa16.37■□□□□ 0.21
PRKCH-206ENST00000553830 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
PRKCH-206ENST00000553830 SMARCC2Q8TAQ2 1214 aa16.37■□□□□ 0.21
PRKCH-206ENST00000553830 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
PRKCH-206ENST00000553830 V9GY48 417 aaPredicted RBP16.37■□□□□ 0.21
PRKCH-206ENST00000553830 COL11A1P12107 1806 aaPredicted RBP16.37■□□□□ 0.21
PRKCH-206ENST00000553830 WDR46O15213 610 aaKnown RBP16.36■□□□□ 0.21
PRKCH-206ENST00000553830 CYTH3O43739 400 aa16.36■□□□□ 0.21
PRKCH-206ENST00000553830 ZNF157P51786 506 aaPredicted RBP16.36■□□□□ 0.21
PRKCH-206ENST00000553830 HMGN5P82970 282 aaKnown RBP16.36■□□□□ 0.21
PRKCH-206ENST00000553830 FSTL1Q12841 308 aa16.36■□□□□ 0.21
PRKCH-206ENST00000553830 SYDE2Q5VT97 1194 aa16.36■□□□□ 0.21
PRKCH-206ENST00000553830 LPAR1Q92633 364 aa16.36■□□□□ 0.21
PRKCH-206ENST00000553830 KIFC2Q96AC6 838 aa16.36■□□□□ 0.21
PRKCH-206ENST00000553830 AIFM3Q96NN9 605 aa16.36■□□□□ 0.21
PRKCH-206ENST00000553830 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
PRKCH-206ENST00000553830 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 FLOT1O75955 427 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 FDPSP14324 419 aaKnown RBP16.35■□□□□ 0.21
PRKCH-206ENST00000553830 STAT2P52630 851 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 FUT2Q10981 343 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 FOXD4L5Q5VV16 416 aaPredicted RBP16.35■□□□□ 0.21
PRKCH-206ENST00000553830 SAPCD2Q86UD0 394 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 ADGRF4Q8IZF3 695 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
PRKCH-206ENST00000553830 RRP36Q96EU6 259 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms