RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 INHAP05111 366 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 PCP11498 1178 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 XRCC5P13010 732 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 CYP2B6P20813 491 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 WDR78Q5VTH9 848 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 GMCL1P1Q8NEA9 526 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 SPATC1LQ9H0A9 340 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 RNF208Q9H0X6 261 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 IL17RBQ9NRM6 502 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 ADAMTS5Q9UNA0 930 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
HNRNPC-208ENST00000553753 MYH4Q9Y623 1939 aa12.08□□□□□ -0.47
HNRNPC-208ENST00000553753 NMT2O60551 498 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 CCL5P13501 91 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 PLS1Q14651 629 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 RRP12Q5JTH9 1297 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 MORN1Q5T089 497 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 AKNAD1Q5T1N1 836 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 MFSD6Q6ZSS7 791 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 LRRC47Q8N1G4 583 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 USP6NLQ92738 828 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 DSCC1Q9BVC3 393 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 MOV10L1Q9BXT6 1211 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 PPP1R9AQ9ULJ8 1098 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 IVNS1ABPQ9Y6Y0 642 aa12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 RBBP6Q7Z6E9 1792 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-208ENST00000553753 VWA5AO00534 786 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 HMGCRP04035 888 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 GJB1P08034 283 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 PTPREP23469 700 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 RGS2P41220 211 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 TMEM132BQ14DG7 1078 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 PRPF38AQ8NAV1 312 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 STAG1Q8WVM7 1258 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 RUFY2Q8WXA3 655 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 IL25Q9H293 177 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 RNF41Q9H4P4 317 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 PLXNB2O15031 1838 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 PDE4DIPQ5VU43 2346 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 STRNO43815 780 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 ERCC3P19447 782 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 CHMLP26374 656 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 NOVP48745 357 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 MAP2K5Q13163 448 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 SLFN13Q68D06 897 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 NKX2-3Q8TAU0 364 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 TRIB2Q92519 343 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 UNC93B1Q9H1C4 597 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 CTNNA3Q9UI47 895 aa12.07□□□□□ -0.48
HNRNPC-208ENST00000553753 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 RAD50Q92878 1312 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 BMP3P12645 472 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 GJA8P48165 433 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 GRB14Q14449 540 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 IMMTQ16891 758 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 NCAPG2Q86XI2 1143 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 TBC1D10CQ8IV04 446 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 TRMT44Q8IYL2 757 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 APBA2Q99767 749 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 MROH8Q9H579 483 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 TCP11L1Q9NUJ3 509 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 FEM1BQ9UK73 627 aa12.06□□□□□ -0.48
HNRNPC-208ENST00000553753 SLC25A27O95847 323 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 MCCP23508 829 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 STAT3P40763 770 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 SLC1A4P43007 532 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 ESR2Q92731 530 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 GMCL1Q96IK5 515 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 PAK6Q9NQU5 681 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 ZNF214Q9UL59 606 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 RPTORQ8N122 1335 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 HOXC6P09630 235 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 ADORA2AP29274 412 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 NT5C2P49902 561 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 STAT2P52630 851 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 TRIM32Q13049 653 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 CCL14Q16627 93 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 DPP9Q86TI2 863 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 RIOX2Q8IUF8 465 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 REPS2Q8NFH8 660 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 U2AF1L4Q8WU68 220 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 CCDC136Q96JN2 1154 aa12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 HMX1Q9NP08 348 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-208ENST00000553753 NEDD4P46934 1319 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 COL11A1P12107 1806 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 SGPL1O95470 568 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 FCER1AP12319 257 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 ABRAQ8N0Z2 381 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 CHURC1Q8WUH1 139 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms