RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 TAF6LQ9Y6J9 622 aa14□□□□□ -0.17
TMEM253-202ENST00000553744 PARP14Q460N5 1801 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 PEX10O60683 326 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 TOP1P11387 765 aaKnown RBP13.99□□□□□ -0.17
TMEM253-202ENST00000553744 TRDNQ13061 729 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 RCSD1Q6JBY9 416 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 MB21D1Q8N884 522 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 ATG4CQ96DT6 458 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 GMCL1Q96IK5 515 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 TTC14Q96N46 770 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 ZKSCAN3Q9BRR0 538 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 FBXO28Q9NVF7 368 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 BTBD7Q9P203 1132 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 PPP1R9AQ9ULJ8 1098 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 PTPN22Q9Y2R2 807 aa13.99□□□□□ -0.17
TMEM253-202ENST00000553744 MGAMO43451 1857 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 E7EWF7 191 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 TNPO2O14787 897 aaKnown RBP13.98□□□□□ -0.17
TMEM253-202ENST00000553744 SLC27A2O14975 620 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 BMP3P12645 472 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 HOXD10P28358 340 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 PRMT2P55345 433 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 NECTIN1Q15223 517 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 Q3C1V9 767 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 CREB3L3Q68CJ9 461 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 STOX1Q6ZVD7 989 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 DGKHQ86XP1 1220 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 ZSCAN10Q96SZ4 725 aaPredicted RBP13.98□□□□□ -0.17
TMEM253-202ENST00000553744 SLF1Q9BQI6 1058 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 ZSWIM5Q9P217 1185 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 SRRDQ9UH36 339 aa13.98□□□□□ -0.17
TMEM253-202ENST00000553744 TNKSO95271 1327 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 SLC1A4P43007 532 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 PRKCZQ05513 592 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
TMEM253-202ENST00000553744 CYB5R4Q7L1T6 521 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 RASGRP2Q7LDG7 609 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 RALYLQ86SE5 291 aaKnown RBP13.97□□□□□ -0.17
TMEM253-202ENST00000553744 NCOA7Q8NI08 942 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 UBAC1Q9BSL1 405 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 FEM1BQ9UK73 627 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 ADAMTS5Q9UNA0 930 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 HPS5Q9UPZ3 1129 aa13.97□□□□□ -0.17
TMEM253-202ENST00000553744 VWA5AO00534 786 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 MCCP23508 829 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 MAPK4P31152 587 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 STAT2P52630 851 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 CCNA1P78396 465 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 ENAHQ8N8S7 591 aaPredicted RBP13.96□□□□□ -0.17
TMEM253-202ENST00000553744 DCAF4Q8WV16 495 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 ANKS1AQ92625 1134 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 COA7Q96BR5 231 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 PORCNQ9H237 461 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 ISY1Q9ULR0 285 aaKnown RBP13.96□□□□□ -0.17
TMEM253-202ENST00000553744 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 PTCH2Q9Y6C5 1203 aa13.96□□□□□ -0.17
TMEM253-202ENST00000553744 HTTP42858 3142 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 TMEM232C9JQI7 657 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 PLA2G6O60733 806 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 TMEM132BQ14DG7 1078 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 CCDC96Q2M329 555 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 PRPF38BQ5VTL8 546 aaKnown RBP13.95□□□□□ -0.18
TMEM253-202ENST00000553744 RNF20Q5VTR2 975 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 KCTD1Q719H9 257 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 FAM160B2Q86V87 743 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
TMEM253-202ENST00000553744 MB21D2Q8IYB1 491 aaPredicted RBP13.95□□□□□ -0.18
TMEM253-202ENST00000553744 PRPF38AQ8NAV1 312 aaKnown RBP13.95□□□□□ -0.18
TMEM253-202ENST00000553744 REPS2Q8NFH8 660 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 CHMP4CQ96CF2 233 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 SPATC1LQ9H0A9 340 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 GABRQQ9UN88 632 aa13.95□□□□□ -0.18
TMEM253-202ENST00000553744 REC8O95072 547 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 SNHG28P0DPA3 235 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 PDHBP11177 359 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 FLT3LGP49771 235 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 SEC23AQ15436 765 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 IFIT1BQ5T764 474 aaKnown RBP13.94□□□□□ -0.18
TMEM253-202ENST00000553744 PNMA1Q8ND90 353 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 SHCBP1Q8NEM2 672 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 RAET1EQ8TD07 263 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 CHURC1Q8WUH1 139 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 KIFC2Q96AC6 838 aa13.94□□□□□ -0.18
TMEM253-202ENST00000553744 MOV10L1Q9BXT6 1211 aaKnown RBP13.94□□□□□ -0.18
TMEM253-202ENST00000553744 ZNF214Q9UL59 606 aaPredicted RBP13.94□□□□□ -0.18
TMEM253-202ENST00000553744 ANTXR2P58335 489 aa13.93□□□□□ -0.18
TMEM253-202ENST00000553744 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
TMEM253-202ENST00000553744 IRF5Q13568 498 aa13.93□□□□□ -0.18
TMEM253-202ENST00000553744 PLS1Q14651 629 aa13.93□□□□□ -0.18
TMEM253-202ENST00000553744 SART3Q15020 963 aaKnown RBP13.93□□□□□ -0.18
TMEM253-202ENST00000553744 PLEKHH3Q7Z736 793 aa13.93□□□□□ -0.18
TMEM253-202ENST00000553744 SOCS4Q8WXH5 440 aa13.93□□□□□ -0.18
TMEM253-202ENST00000553744 SLC38A10Q9HBR0 1119 aa13.93□□□□□ -0.18
TMEM253-202ENST00000553744 CWC22Q9HCG8 908 aaKnown RBP13.93□□□□□ -0.18
TMEM253-202ENST00000553744 GJD2Q9UKL4 321 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms