RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 KRT32Q14532 448 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 SART3Q15020 963 aaKnown RBP16.75■□□□□ 0.27
SV2B-204ENST00000553727 CCDC96Q2M329 555 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 IFIT1BQ5T764 474 aaKnown RBP16.75■□□□□ 0.27
SV2B-204ENST00000553727 KCTD1Q719H9 257 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 RASGRP2Q7LDG7 609 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 GTF3C2Q8WUA4 911 aaPredicted RBP16.75■□□□□ 0.27
SV2B-204ENST00000553727 ANKS1AQ92625 1134 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 GMCL1Q96IK5 515 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 NEK1Q96PY6 1258 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 TXNRD2Q9NNW7 524 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 RBPJLQ9UBG7 517 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 PCNTO95613 3336 aa16.75■□□□□ 0.27
SV2B-204ENST00000553727 TMEM232C9JQI7 657 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
SV2B-204ENST00000553727 PRC1O43663 620 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 ANTXR2P58335 489 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 FAM110CQ1W6H9 321 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 PNMA1Q8ND90 353 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 SLF1Q9BQI6 1058 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 ARHGAP39Q9C0H5 1083 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 FEM1BQ9UK73 627 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
SV2B-204ENST00000553727 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
SV2B-204ENST00000553727 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
SV2B-204ENST00000553727 PSMC4P43686 418 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 COL9A3Q14050 684 aaPredicted RBP16.73■□□□□ 0.27
SV2B-204ENST00000553727 WTAPQ15007 396 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 ARHGEF6Q15052 776 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 SEC23AQ15436 765 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 Q3C1V9 767 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 ADCK5Q3MIX3 580 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 COL13A1Q5TAT6 717 aaPredicted RBP16.73■□□□□ 0.27
SV2B-204ENST00000553727 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
SV2B-204ENST00000553727 DCAF4Q8WV16 495 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 KIFC2Q96AC6 838 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 GPCPD1Q9NPB8 672 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 MORF4L1Q9UBU8 362 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 PPP1R9AQ9ULJ8 1098 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 RABGAP1Q9Y3P9 1069 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 TRIM17Q9Y577 477 aa16.73■□□□□ 0.27
SV2B-204ENST00000553727 FRMPD2Q68DX3 1309 aaPredicted RBP16.72■□□□□ 0.27
SV2B-204ENST00000553727 PDHBP11177 359 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 ERVK-9P63128 1117 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 ERVK-24P63145 666 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 CAP1Q01518 475 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 PLS1Q14651 629 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 CTU1Q7Z7A3 348 aaKnown RBP16.72■□□□□ 0.27
SV2B-204ENST00000553727 PRPF38AQ8NAV1 312 aaKnown RBP16.72■□□□□ 0.27
SV2B-204ENST00000553727 IGDCC4Q8TDY8 1250 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 KCNB2Q92953 911 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 JAKMIP1Q96N16 626 aaKnown RBP16.72■□□□□ 0.27
SV2B-204ENST00000553727 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 EFCC1Q9HA90 598 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 SENP2Q9HC62 589 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 BTBD7Q9P203 1132 aa16.72■□□□□ 0.27
SV2B-204ENST00000553727 CTDP1Q9Y5B0 961 aaPredicted RBP16.72■□□□□ 0.27
SV2B-204ENST00000553727 MYPNQ86TC9 1320 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 MYH4Q9Y623 1939 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 CNMDO75829 334 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 SEC24BO95487 1268 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 CTGFP29279 349 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 STAT2P52630 851 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 FCGRTP55899 365 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 TTBK2Q6IQ55 1244 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 FAM160B2Q86V87 743 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 MB21D1Q8N884 522 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
SV2B-204ENST00000553727 CWC22Q9HCG8 908 aaKnown RBP16.71■□□□□ 0.27
SV2B-204ENST00000553727 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
SV2B-204ENST00000553727 CASP8AP2Q9UKL3 1982 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 VWA5AO00534 786 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 TNPO2O14787 897 aaKnown RBP16.7■□□□□ 0.26
SV2B-204ENST00000553727 ZBED4O75132 1171 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
SV2B-204ENST00000553727 GOLGA8HP0CJ92 632 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 CPA1P15085 419 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 SLC16A2P36021 539 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 CCNA1P78396 465 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 ZNF543Q08ER8 600 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 NFXL1Q6ZNB6 911 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
SV2B-204ENST00000553727 OTOP1Q7RTM1 612 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 TRIM47Q96LD4 638 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
SV2B-204ENST00000553727 SNHG28P0DPA3 235 aa16.69■□□□□ 0.26
SV2B-204ENST00000553727 PSMA5P28066 241 aa16.69■□□□□ 0.26
SV2B-204ENST00000553727 SLC4A3P48751 1232 aa16.69■□□□□ 0.26
SV2B-204ENST00000553727 FGD1P98174 961 aa16.69■□□□□ 0.26
SV2B-204ENST00000553727 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
SV2B-204ENST00000553727 WDR78Q5VTH9 848 aa16.69■□□□□ 0.26
SV2B-204ENST00000553727 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms