RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ERO1BQ86YB8 467 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 STAG2Q8N3U4 1231 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 GMCL1P1Q8NEA9 526 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 DCAF4Q8WV16 495 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 OPTNQ96CV9 577 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 WDR18Q9BV38 432 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 VCPKMTQ9H867 229 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 ABT1Q9ULW3 272 aaKnown RBP11.36□□□□□ -0.59
CHD8-204ENST00000553622 SMCHD1A6NHR9 2005 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 PTPDC1A2A3K4 754 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 SPDYE5A6NIY4 337 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 KLRF2D3W0D1 207 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 BMP3P12645 472 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 GNAQP50148 359 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 USP14P54578 494 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 HMGCS2P54868 508 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
CHD8-204ENST00000553622 SSRP1Q08945 709 aaKnown RBP11.35□□□□□ -0.59
CHD8-204ENST00000553622 ZNF543Q08ER8 600 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 DGKZQ13574 1117 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 PPP2R5BQ15173 497 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 KIAA1755Q5JYT7 1200 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 FAM83BQ5T0W9 1011 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 LDLRAD1Q5T700 205 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 GADL1Q6ZQY3 521 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 TMTC3Q6ZXV5 915 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 TRIM22Q8IYM9 498 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 FAM184AQ8NB25 1140 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 PHKBQ93100 1093 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 SLC26A6Q9BXS9 759 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 TANGO6Q9C0B7 1094 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 UBA5Q9GZZ9 404 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 KIAA1683Q9H0B3 1180 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 CPVLQ9H3G5 476 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 VAT1LQ9HCJ6 419 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 FAM217BQ9NTX9 383 aaPredicted RBP11.35□□□□□ -0.59
CHD8-204ENST00000553622 MAD2L2Q9UI95 211 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 SYNPO2Q9UMS6 1093 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 AFG3L2Q9Y4W6 797 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 NID2Q14112 1375 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
CHD8-204ENST00000553622 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
CHD8-204ENST00000553622 C19orf81C9J6K1 198 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 CTDNEP1O95476 244 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 GJB2P29033 226 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 SLC16A2P36021 539 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 BACE1P56817 501 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 PPATQ06203 517 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 PPIL2Q13356 520 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 GPATCH4Q5T3I0 446 aaKnown RBP11.34□□□□□ -0.59
CHD8-204ENST00000553622 TTBK2Q6IQ55 1244 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
CHD8-204ENST00000553622 SRBD1Q8N5C6 995 aaKnown RBP11.34□□□□□ -0.59
CHD8-204ENST00000553622 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
CHD8-204ENST00000553622 GMCL1Q96IK5 515 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 MAP3K14Q99558 947 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
CHD8-204ENST00000553622 LLPHQ9BRT6 129 aaKnown RBP11.34□□□□□ -0.59
CHD8-204ENST00000553622 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
CHD8-204ENST00000553622 hCG_1642624A0A1W2PR95 340 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 TMEM232C9JQI7 657 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 IRF6O14896 467 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 SNHG28P0DPA3 235 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 VCAM1P19320 739 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 ZNF157P51786 506 aaPredicted RBP11.33□□□□□ -0.6
CHD8-204ENST00000553622 FSTL1Q12841 308 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 HOMER1Q86YM7 354 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 LPAR1Q92633 364 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 INTS4Q96HW7 963 aaKnown RBP11.33□□□□□ -0.6
CHD8-204ENST00000553622 WNK4Q96J92 1243 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 RPAP3Q9H6T3 665 aaPredicted RBP11.33□□□□□ -0.6
CHD8-204ENST00000553622 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 RLFQ13129 1914 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
CHD8-204ENST00000553622 UNCXA6NJT0 531 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
CHD8-204ENST00000553622 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
CHD8-204ENST00000553622 IFNAR1P17181 557 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 GJA5P36382 358 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 STAT2P52630 851 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 HMGN5P82970 282 aaKnown RBP11.32□□□□□ -0.6
CHD8-204ENST00000553622 GRM1Q13255 1194 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 NTRK3Q16288 839 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 NBPF11Q86T75 865 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 KIFC2Q96AC6 838 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
CHD8-204ENST00000553622 SEC63Q9UGP8 760 aaKnown RBP11.32□□□□□ -0.6
CHD8-204ENST00000553622 KIF3AQ9Y496 699 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
CHD8-204ENST00000553622 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
CHD8-204ENST00000553622 TCHHQ07283 1943 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 CXCL11O14625 94 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 FLOT1O75955 427 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 SNAP25P60880 206 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 SNAPC2Q13487 334 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 SYDE2Q5VT97 1194 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 RGMBQ6NW40 437 aa11.31□□□□□ -0.6
CHD8-204ENST00000553622 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms