RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 SART3Q15020 963 aaKnown RBP9.42□□□□□ -0.9
SNRPN-206ENST00000553597 SLFN13Q68D06 897 aa9.42□□□□□ -0.9
SNRPN-206ENST00000553597 RCSD1Q6JBY9 416 aa9.42□□□□□ -0.9
SNRPN-206ENST00000553597 NFXL1Q6ZNB6 911 aa9.42□□□□□ -0.9
SNRPN-206ENST00000553597 CCDC144CPQ8IYA2 1237 aa9.42□□□□□ -0.9
SNRPN-206ENST00000553597 PARK7Q99497 189 aaKnown RBP9.42□□□□□ -0.9
SNRPN-206ENST00000553597 WBP1LQ9NX94 342 aa9.42□□□□□ -0.9
SNRPN-206ENST00000553597 ZNFX1Q9P2E3 1918 aaKnown RBP9.42□□□□□ -0.9
SNRPN-206ENST00000553597 PLXNA1Q9UIW2 1896 aa9.42□□□□□ -0.9
SNRPN-206ENST00000553597 DOCK3Q8IZD9 2030 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L15C9J2P7 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L13C9JLJ4 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L11C9JVI0 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L18D6R9N7 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L22D6RA61 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L17D6RBQ6 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L19D6RCP7 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L20D6RJB6 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 WDR46O15213 610 aaKnown RBP9.41□□□□□ -0.9
SNRPN-206ENST00000553597 GOLGA8HP0CJ92 632 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 OSBPP22059 807 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 INHBEP58166 350 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 SNAP25P60880 206 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 USP17L24Q0WX57 530 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 PABPC4Q13310 644 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNRPN-206ENST00000553597 KRT32Q14532 448 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 BLOC1S2Q6QNY1 142 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 ANKRD13CQ8N6S4 541 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 PNMA1Q8ND90 353 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 NUP133Q8WUM0 1156 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 ATG4CQ96DT6 458 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 C12orf42Q96LP6 360 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
SNRPN-206ENST00000553597 CPVLQ9H3G5 476 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 ZFYVE28Q9HCC9 887 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
SNRPN-206ENST00000553597 CCDC69A6NI79 296 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 TMEM232C9JQI7 657 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 SH2B2O14492 632 aaPredicted RBP9.4□□□□□ -0.9
SNRPN-206ENST00000553597 CA12O43570 354 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 DHX16O60231 1041 aaKnown RBP9.4□□□□□ -0.9
SNRPN-206ENST00000553597 ALDH1A1P00352 501 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 HSPA8P11142 646 aaKnown RBP9.4□□□□□ -0.9
SNRPN-206ENST00000553597 BMP3P12645 472 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 TAL1P17542 331 aaPredicted RBP9.4□□□□□ -0.9
SNRPN-206ENST00000553597 RPS6KB1P23443 525 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 SLC16A2P36021 539 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 SLC1A4P43007 532 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 LBX1P52954 281 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 HERVK_113P62684 666 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 PLS1Q14651 629 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 SEC23AQ15436 765 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 PPP4R3BQ5MIZ7 849 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 TTBK2Q6IQ55 1244 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 MICU3Q86XE3 530 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 PIBF1Q8WXW3 757 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 LPAR1Q92633 364 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 P2RX7Q99572 595 aaKnown RBP9.4□□□□□ -0.9
SNRPN-206ENST00000553597 UPF2Q9HAU5 1272 aaKnown RBP9.4□□□□□ -0.9
SNRPN-206ENST00000553597 LY9Q9HBG7 655 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 TCP11L1Q9NUJ3 509 aa9.4□□□□□ -0.9
SNRPN-206ENST00000553597 ADGRA2Q96PE1 1338 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 SPDYE16A6NNV3 312 aaPredicted RBP9.39□□□□□ -0.91
SNRPN-206ENST00000553597 PDHBP11177 359 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 PSMA5P28066 241 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 APOBRQ0VD83 1088 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 CCDC178Q5BJE1 867 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 WDR78Q5VTH9 848 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 CATSPERGQ6ZRH7 1159 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 Q6ZUG5 572 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 DHX32Q7L7V1 743 aaKnown RBP9.39□□□□□ -0.91
SNRPN-206ENST00000553597 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 GMCL1P1Q8NEA9 526 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 CD99L2Q8TCZ2 262 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 KCNB2Q92953 911 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 BRF1Q92994 677 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 MKL1Q969V6 931 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 C22orf23Q9BZE7 217 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 CTDP1Q9Y5B0 961 aaPredicted RBP9.39□□□□□ -0.91
SNRPN-206ENST00000553597 CYP46A1Q9Y6A2 500 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 LCTP09848 1927 aa9.39□□□□□ -0.91
SNRPN-206ENST00000553597 KLF18A0A0U1RQI7 1052 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 GOLGA8BA8MQT2 603 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 GPR25O00155 361 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 TLR2O60603 784 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 CTCFP49711 727 aaPredicted RBP9.38□□□□□ -0.91
SNRPN-206ENST00000553597 STAT2P52630 851 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 CCDC174Q6PII3 467 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 RUFY3Q7L099 469 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 CATIPQ7Z7H3 387 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 DGKHQ86XP1 1220 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 CPXCR1Q8N123 301 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 IGDCC4Q8TDY8 1250 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 ZNF296Q8WUU4 475 aaPredicted RBP9.38□□□□□ -0.91
SNRPN-206ENST00000553597 DCAF4Q8WV16 495 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 TMEM87BQ96K49 555 aa9.38□□□□□ -0.91
SNRPN-206ENST00000553597 SLF1Q9BQI6 1058 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms