RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 EPHB4P54760 987 aa14.25□□□□□ -0.13
SRP54-203ENST00000553544 FPGSQ05932 587 aa14.25□□□□□ -0.13
SRP54-203ENST00000553544 TTF1Q15361 905 aaPredicted RBP14.25□□□□□ -0.13
SRP54-203ENST00000553544 FAM47AQ5JRC9 791 aa14.25□□□□□ -0.13
SRP54-203ENST00000553544 DCTPP1Q9H773 170 aa14.25□□□□□ -0.13
SRP54-203ENST00000553544 NAV1Q8NEY1 1877 aa14.25□□□□□ -0.13
SRP54-203ENST00000553544 MYH8P13535 1937 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 MAGEB6P1A0A0J9YX57 407 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 DCDC2CA8MYV0 355 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 PQBP1O60828 265 aaKnown RBP14.24□□□□□ -0.13
SRP54-203ENST00000553544 FLOT1O75955 427 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 ATP5JP18859 108 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 COL9A1P20849 921 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 RRP1P56182 461 aaKnown RBP14.24□□□□□ -0.13
SRP54-203ENST00000553544 GABPAQ06546 454 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 TOX2Q96NM4 488 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 LRRCC1Q9C099 1032 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 MCM9Q9NXL9 1143 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 CDH23Q9H251 3354 aa14.24□□□□□ -0.13
SRP54-203ENST00000553544 PGK1P00558 417 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 DNAJB2P25686 324 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 TMEM179Q6ZVK1 233 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 NUP133Q8WUM0 1156 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 MMP19Q99542 508 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 RIOK1Q9BRS2 568 aaKnown RBP14.23□□□□□ -0.13
SRP54-203ENST00000553544 TINF2Q9BSI4 451 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 TSEN34Q9BSV6 310 aaKnown RBP14.23□□□□□ -0.13
SRP54-203ENST00000553544 CRNKL1Q9BZJ0 848 aaKnown RBP14.23□□□□□ -0.13
SRP54-203ENST00000553544 ZNF576Q9H609 170 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 ARHGEF10LQ9HCE6 1279 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 DIS3Q9Y2L1 958 aaKnown RBP14.23□□□□□ -0.13
SRP54-203ENST00000553544 RLFQ13129 1914 aa14.23□□□□□ -0.13
SRP54-203ENST00000553544 A0A1W2PQ45 241 aaPredicted RBP14.22□□□□□ -0.13
SRP54-203ENST00000553544 A0A1W2PQY0 241 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 TCRBV5S4A2TA0A5A2 114 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 GOLIM4O00461 696 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 SMARCA5O60264 1052 aaPredicted RBP14.22□□□□□ -0.13
SRP54-203ENST00000553544 FAAP100Q0VG06 881 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 KCTD2Q14681 263 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 KIAA1755Q5JYT7 1200 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 CCDC174Q6PII3 467 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
SRP54-203ENST00000553544 ANKRD33Q7Z3H0 272 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 SLC44A5Q8NCS7 719 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 TIFAQ96CG3 184 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 ATG4CQ96DT6 458 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 HAUS7Q99871 368 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 BOLA2Q9H3K6 86 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 SH2D4AQ9H788 454 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 SWAP70Q9UH65 585 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 TMX2Q9Y320 296 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 PCDHB15Q9Y5E8 787 aa14.22□□□□□ -0.13
SRP54-203ENST00000553544 FRMPD3Q5JV73 1810 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 TIMP1P01033 207 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 PGK2P07205 417 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 AKR1A1P14550 325 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 PDE6AP16499 860 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 ACLYP53396 1101 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 TMEM132BQ14DG7 1078 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 SLC9C2Q5TAH2 1124 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 SIAH1Q8IUQ4 282 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 USP38Q8NB14 1042 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 ATXN2LQ8WWM7 1075 aaKnown RBP14.21□□□□□ -0.13
SRP54-203ENST00000553544 GAS2L1Q99501 681 aaPredicted RBP14.21□□□□□ -0.13
SRP54-203ENST00000553544 DNAJC2Q99543 621 aaKnown RBP14.21□□□□□ -0.13
SRP54-203ENST00000553544 CNPY2Q9Y2B0 182 aa14.21□□□□□ -0.13
SRP54-203ENST00000553544 LTBP2Q14767 1821 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 BAZ2AQ9UIF9 1905 aaKnown RBP14.2□□□□□ -0.14
SRP54-203ENST00000553544 WDR46O15213 610 aaKnown RBP14.2□□□□□ -0.14
SRP54-203ENST00000553544 ZNF865P0CJ78 1059 aaPredicted RBP14.2□□□□□ -0.14
SRP54-203ENST00000553544 TAL1P17542 331 aaPredicted RBP14.2□□□□□ -0.14
SRP54-203ENST00000553544 STAT3P40763 770 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 ZNF792Q3KQV3 632 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 RIOX2Q8IUF8 465 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 PPM1EQ8WY54 764 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
SRP54-203ENST00000553544 BCL11AQ9H165 835 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 VCPKMTQ9H867 229 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 STARD7Q9NQZ5 370 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 PAG1Q9NWQ8 432 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 ADAMTS5Q9UNA0 930 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 MUC3AQ02505 3323 aa14.2□□□□□ -0.14
SRP54-203ENST00000553544 ZNF532Q9HCE3 1301 aa14.19□□□□□ -0.14
SRP54-203ENST00000553544 COPB2P35606 906 aa14.19□□□□□ -0.14
SRP54-203ENST00000553544 ADD2P35612 726 aa14.19□□□□□ -0.14
SRP54-203ENST00000553544 AKNAD1Q5T1N1 836 aa14.19□□□□□ -0.14
SRP54-203ENST00000553544 MFSD5Q6N075 450 aa14.19□□□□□ -0.14
SRP54-203ENST00000553544 CCDC129Q6ZRS4 1044 aa14.19□□□□□ -0.14
SRP54-203ENST00000553544 CCDC17Q96LX7 622 aa14.19□□□□□ -0.14
SRP54-203ENST00000553544 FAM184BQ9ULE4 1060 aa14.19□□□□□ -0.14
SRP54-203ENST00000553544 MOXD2PA6NHM9 499 aa14.18□□□□□ -0.14
SRP54-203ENST00000553544 EVX2Q03828 476 aa14.18□□□□□ -0.14
SRP54-203ENST00000553544 ICA1Q05084 483 aa14.18□□□□□ -0.14
SRP54-203ENST00000553544 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.147e-9■□□□□ 8.7
SRP54-203ENST00000553544 KCNA10Q16322 511 aa14.18□□□□□ -0.14
SRP54-203ENST00000553544 MSL3Q8N5Y2 521 aaKnown RBP14.18□□□□□ -0.14
SRP54-203ENST00000553544 VTI1AQ96AJ9 217 aa14.18□□□□□ -0.14
SRP54-203ENST00000553544 ASB2Q96Q27 587 aa14.18□□□□□ -0.14
SRP54-203ENST00000553544 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms