RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 C19orf73Q9NVV2 129 aa10.75□□□□□ -0.69
PCNX1-205ENST00000553508 PAX4O43316 350 aa10.74□□□□□ -0.69
PCNX1-205ENST00000553508 AUHQ13825 339 aaKnown RBP10.74□□□□□ -0.69
PCNX1-205ENST00000553508 PPFIBP1Q86W92 1011 aa10.74□□□□□ -0.69
PCNX1-205ENST00000553508 SYTL5Q8TDW5 730 aaPredicted RBP10.74□□□□□ -0.69
PCNX1-205ENST00000553508 ASIC4Q96FT7 647 aa10.74□□□□□ -0.69
PCNX1-205ENST00000553508 TCTN2Q96GX1 697 aa10.74□□□□□ -0.69
PCNX1-205ENST00000553508 GFOD1Q9NXC2 390 aa10.74□□□□□ -0.69
PCNX1-205ENST00000553508 TMEM59LQ9UK28 342 aa10.74□□□□□ -0.69
PCNX1-205ENST00000553508 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
PCNX1-205ENST00000553508 PCDHB12Q9Y5F1 795 aa10.74□□□□□ -0.69
PCNX1-205ENST00000553508 PMS1P54277 932 aaKnown RBP10.73□□□□□ -0.69
PCNX1-205ENST00000553508 DCAF15Q66K64 600 aa10.73□□□□□ -0.69
PCNX1-205ENST00000553508 FLAD1Q8NFF5 587 aa10.73□□□□□ -0.69
PCNX1-205ENST00000553508 ENOX1Q8TC92 643 aaKnown RBP10.73□□□□□ -0.69
PCNX1-205ENST00000553508 ANAPC16Q96DE5 110 aa10.73□□□□□ -0.69
PCNX1-205ENST00000553508 SHDQ96IW2 340 aa10.73□□□□□ -0.69
PCNX1-205ENST00000553508 FOXP3Q9BZS1 431 aa10.73□□□□□ -0.69
PCNX1-205ENST00000553508 SSU72P8A0A1W2PR75 194 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 ATF4P18848 351 aaPredicted RBP10.72□□□□□ -0.69
PCNX1-205ENST00000553508 GDNFP39905 211 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 ERVFC1P60507 584 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 FYB2Q5VWT5 728 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 VPS37DQ86XT2 251 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 USHBP1Q8N6Y0 703 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 DAGLBQ8NCG7 672 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 FAM168AQ92567 244 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 SYTL4Q96C24 671 aaPredicted RBP10.72□□□□□ -0.69
PCNX1-205ENST00000553508 LTBP3Q9NS15 1303 aa10.72□□□□□ -0.69
PCNX1-205ENST00000553508 SIGLEC6O43699 453 aa10.71□□□□□ -0.69
PCNX1-205ENST00000553508 FKTNO75072 461 aa10.71□□□□□ -0.69
PCNX1-205ENST00000553508 RPL10P27635 214 aaKnown RBP10.71□□□□□ -0.69
PCNX1-205ENST00000553508 AFMP43652 599 aa10.71□□□□□ -0.69
PCNX1-205ENST00000553508 AXDND1Q5T1B0 1012 aaPredicted RBP10.71□□□□□ -0.69
PCNX1-205ENST00000553508 C7orf61Q8IZ16 206 aa10.71□□□□□ -0.69
PCNX1-205ENST00000553508 CCDC120Q96HB5 630 aa10.71□□□□□ -0.69
PCNX1-205ENST00000553508 CHST7Q9NS84 486 aa10.71□□□□□ -0.69
PCNX1-205ENST00000553508 PCDHB10Q9UN67 800 aa10.71□□□□□ -0.69
PCNX1-205ENST00000553508 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
PCNX1-205ENST00000553508 A0A1W2PQH9 124 aa10.7□□□□□ -0.7
PCNX1-205ENST00000553508 TEKQ02763 1124 aa10.7□□□□□ -0.7
PCNX1-205ENST00000553508 ZNF655Q8N720 491 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-205ENST00000553508 OR6P1Q8NGX9 317 aa10.7□□□□□ -0.7
PCNX1-205ENST00000553508 MRVI1Q9Y6F6 885 aa10.7□□□□□ -0.7
PCNX1-205ENST00000553508 SYPP08247 313 aa10.69□□□□□ -0.7
PCNX1-205ENST00000553508 PCBP3P57721 371 aaKnown RBP10.69□□□□□ -0.7
PCNX1-205ENST00000553508 GNL2Q13823 731 aaKnown RBP10.69□□□□□ -0.7
PCNX1-205ENST00000553508 KCNMB1Q16558 191 aa10.69□□□□□ -0.7
PCNX1-205ENST00000553508 GNPTABQ3T906 1256 aa10.69□□□□□ -0.7
PCNX1-205ENST00000553508 FAM169BQ8N8A8 192 aa10.69□□□□□ -0.7
PCNX1-205ENST00000553508 KIRREL1Q96J84 757 aa10.69□□□□□ -0.7
PCNX1-205ENST00000553508 DSCC1Q9BVC3 393 aa10.69□□□□□ -0.7
PCNX1-205ENST00000553508 TCFL5Q9UL49 500 aa10.69□□□□□ -0.7
PCNX1-205ENST00000553508 ZGLP1P0C6A0 271 aa10.68□□□□□ -0.7
PCNX1-205ENST00000553508 NOL9Q5SY16 702 aaKnown RBP10.68□□□□□ -0.7
PCNX1-205ENST00000553508 ZSWIM9Q86XI8 627 aa10.68□□□□□ -0.7
PCNX1-205ENST00000553508 BRF1Q92994 677 aa10.68□□□□□ -0.7
PCNX1-205ENST00000553508 ZNF214Q9UL59 606 aaPredicted RBP10.68□□□□□ -0.7
PCNX1-205ENST00000553508 SHOXO15266 292 aa10.67□□□□□ -0.7
PCNX1-205ENST00000553508 SSBP05455 408 aaKnown RBP eCLIP10.67□□□□□ -0.7
PCNX1-205ENST00000553508 RAC2P15153 192 aa10.67□□□□□ -0.7
PCNX1-205ENST00000553508 TRHRP34981 398 aaPredicted RBP10.67□□□□□ -0.7
PCNX1-205ENST00000553508 BBS9Q3SYG4 887 aa10.67□□□□□ -0.7
PCNX1-205ENST00000553508 ZPBP2Q6X784 338 aa10.67□□□□□ -0.7
PCNX1-205ENST00000553508 RNF111Q6ZNA4 994 aa10.67□□□□□ -0.7
PCNX1-205ENST00000553508 WAPLQ7Z5K2 1190 aa10.67□□□□□ -0.7
PCNX1-205ENST00000553508 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
PCNX1-205ENST00000553508 ZMYM5Q9UJ78 669 aa10.67□□□□□ -0.7
PCNX1-205ENST00000553508 SLC12A7Q9Y666 1083 aa10.67□□□□□ -0.7
PCNX1-205ENST00000553508 DHX38Q92620 1227 aaKnown RBP10.66□□□□□ -0.7
PCNX1-205ENST00000553508 STRIP2Q9ULQ0 834 aa10.66□□□□□ -0.7
PCNX1-205ENST00000553508 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.66□□□□□ -0.7
PCNX1-205ENST00000553508 CTSKP43235 329 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 CRTC3Q6UUV7 619 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 ABHD4Q8TB40 342 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 MYLIPQ8WY64 445 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.65□□□□□ -0.71e-7■□□□□ 8.4
PCNX1-205ENST00000553508 TINF2Q9BSI4 451 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 C19orf44Q9H6X5 657 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 GP6Q9HCN6 339 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 EBF1Q9UH73 591 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 ZNF451Q9Y4E5 1061 aa10.65□□□□□ -0.7
PCNX1-205ENST00000553508 CD247P20963 164 aa10.64□□□□□ -0.71
PCNX1-205ENST00000553508 DNAJA1P31689 397 aaKnown RBP10.64□□□□□ -0.71
PCNX1-205ENST00000553508 TMEM67Q5HYA8 995 aa10.64□□□□□ -0.71
PCNX1-205ENST00000553508 C19orf47Q8N9M1 422 aaKnown RBP10.64□□□□□ -0.71
PCNX1-205ENST00000553508 LINC00116Q8NCU8 138 aa10.64□□□□□ -0.71
PCNX1-205ENST00000553508 PHAXQ9H814 394 aaKnown RBP10.64□□□□□ -0.71
PCNX1-205ENST00000553508 IGSF5Q9NSI5 407 aa10.64□□□□□ -0.71
PCNX1-205ENST00000553508 ZNF445P59923 1031 aa10.63□□□□□ -0.71
PCNX1-205ENST00000553508 SLC7A5Q01650 507 aa10.63□□□□□ -0.71
PCNX1-205ENST00000553508 ANKRD39Q53RE8 183 aa10.63□□□□□ -0.71
PCNX1-205ENST00000553508 PDZD8Q8NEN9 1154 aa10.63□□□□□ -0.71
PCNX1-205ENST00000553508 HPXP02790 462 aa10.62□□□□□ -0.71
PCNX1-205ENST00000553508 ARID5AQ03989 594 aa10.62□□□□□ -0.71
PCNX1-205ENST00000553508 DUSP4Q13115 394 aa10.62□□□□□ -0.71
PCNX1-205ENST00000553508 OXR1Q8N573 874 aa10.62□□□□□ -0.71
PCNX1-205ENST00000553508 ADCY4Q8NFM4 1077 aa10.62□□□□□ -0.71
PCNX1-205ENST00000553508 LIN37Q96GY3 246 aaPredicted RBP10.62□□□□□ -0.71
PCNX1-205ENST00000553508 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms